Gene : Glyma.02G310900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10796 - PATCHED-RELATED Genomic Order:  3109
Name:  ? Glyma.02G310900 Secondary Identifier:  ? PAC:30508094
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G310900 0.5kb upstream 0.5kb upstream 47474 true Chr02: 48391567-48439040 Glycine max
Glyma.02G310900 0.5kb upstream 0.5kb upstream 500 false Chr02: 48391567-48392066 Glycine max
Glyma.02G310900 0.5kb downstream 0.5kb downstream 47474 true Chr02: 48392067-48439540 Glycine max
Glyma.02G310900 0.5kb downstream 0.5kb downstream 500 false Chr02: 48439041-48439540 Glycine max
Glyma.02G310900 1.0kb upstream 1.0kb upstream 47974 true Chr02: 48391067-48439040 Glycine max
Glyma.02G310900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48391067-48392066 Glycine max
Glyma.02G310900 1.0kb downstream 1.0kb downstream 47974 true Chr02: 48392067-48440040 Glycine max
Glyma.02G310900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48439041-48440040 Glycine max
Glyma.02G310900 2.0kb upstream 2.0kb upstream 48974 true Chr02: 48390067-48439040 Glycine max
Glyma.02G310900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48390067-48392066 Glycine max
Glyma.02G310900 2.0kb downstream 2.0kb downstream 48974 true Chr02: 48392067-48441040 Glycine max
Glyma.02G310900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48439041-48441040 Glycine max
Glyma.02G310900 5.0kb upstream 5.0kb upstream 51974 true Chr02: 48387067-48439040 Glycine max
Glyma.02G310900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48387067-48392066 Glycine max
Glyma.02G310900 5.0kb downstream 5.0kb downstream 51974 true Chr02: 48392067-48444040 Glycine max
Glyma.02G310900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48439041-48444040 Glycine max
Glyma.02G310900 10.0kb upstream 10.0kb upstream 56974 true Chr02: 48382067-48439040 Glycine max
Glyma.02G310900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48382067-48392066 Glycine max
Glyma.02G310900 10.0kb downstream 10.0kb downstream 56974 true Chr02: 48392067-48449040 Glycine max
Glyma.02G310900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48439041-48449040 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312597 5265 Fabidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0276 0.0 40.709    
cufflinks 10.9707 0.0 40.6331    
cufflinks 11.2424 0.0 41.1143    
cufflinks 15.0442 0.0 57.886   High
cufflinks 9.26661 0.0 27.6727    
cufflinks 9.16258 0.0 33.1953    
cufflinks 15.2531 0.0 59.3166   High
cufflinks 8.63668 0.0 25.5898   Low
cufflinks 10.8502 0.0 39.6158    
cufflinks 0.429        
cufflinks 0.158       Low
cufflinks 0.591        
cufflinks 0.436        
cufflinks 0.425        
cufflinks 0.259        
cufflinks 0.474        
cufflinks 0.285        
cufflinks 0.722       High
cufflinks 0.588        
cufflinks 0.572        
cufflinks 0.187       Low
cufflinks 0.551        
cufflinks 0.486        
cufflinks 0.21       Low
cufflinks 0.515        
cufflinks 0.235       Low

0 Strain