Gene : Glyma.05G248300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10593:SF43 - SHOOT GRAVITROPISM5-LIKE PROTEIN Genomic Order:  2483
Name:  ? Glyma.05G248300 Secondary Identifier:  ? PAC:30525276
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G248300 0.5kb upstream 0.5kb upstream 2714 true Chr05: 42136611-42139324 Glycine max
Glyma.05G248300 0.5kb upstream 0.5kb upstream 500 false Chr05: 42138825-42139324 Glycine max
Glyma.05G248300 0.5kb downstream 0.5kb downstream 2714 true Chr05: 42136111-42138824 Glycine max
Glyma.05G248300 0.5kb downstream 0.5kb downstream 500 false Chr05: 42136111-42136610 Glycine max
Glyma.05G248300 1.0kb upstream 1.0kb upstream 3214 true Chr05: 42136611-42139824 Glycine max
Glyma.05G248300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42138825-42139824 Glycine max
Glyma.05G248300 1.0kb downstream 1.0kb downstream 3214 true Chr05: 42135611-42138824 Glycine max
Glyma.05G248300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42135611-42136610 Glycine max
Glyma.05G248300 2.0kb upstream 2.0kb upstream 4214 true Chr05: 42136611-42140824 Glycine max
Glyma.05G248300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42138825-42140824 Glycine max
Glyma.05G248300 2.0kb downstream 2.0kb downstream 4214 true Chr05: 42134611-42138824 Glycine max
Glyma.05G248300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42134611-42136610 Glycine max
Glyma.05G248300 5.0kb upstream 5.0kb upstream 7214 true Chr05: 42136611-42143824 Glycine max
Glyma.05G248300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42138825-42143824 Glycine max
Glyma.05G248300 5.0kb downstream 5.0kb downstream 7214 true Chr05: 42131611-42138824 Glycine max
Glyma.05G248300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42131611-42136610 Glycine max
Glyma.05G248300 10.0kb upstream 10.0kb upstream 12214 true Chr05: 42136611-42148824 Glycine max
Glyma.05G248300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42138825-42148824 Glycine max
Glyma.05G248300 10.0kb downstream 10.0kb downstream 12214 true Chr05: 42126611-42138824 Glycine max
Glyma.05G248300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42126611-42136610 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254522 5265 Fabidae View MSA
124038864 5270 Rosid View MSA
123753156 5271 Pentapetalae View MSA
122787827 5272 Eudicot View MSA
122044064 5273 Angiosperm View MSA
121351060 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34538 0.0 4.57572    
cufflinks 7.00392 0.0 19.3571   High
cufflinks 0.530881 0.0 1.94409    
cufflinks 0.199674 0.0 0.765132    
cufflinks 1.05568 0.0 3.67147    
cufflinks 0.15983 0.0 0.618368 Low  
cufflinks 0.487664 0.0 1.79145    
cufflinks 4.37387 0.0 12.6528   High
cufflinks 0.0863238 0.0 0.341979 Low Low
cufflinks 0.99        
cufflinks 0.025     Low  
cufflinks 0.554        
cufflinks 0.05     Low  
cufflinks 0.074        
cufflinks 0.009     Low Low
cufflinks 3.17       High
cufflinks 0.006     Low Low
cufflinks 0.844        
cufflinks 3.967       High
cufflinks 2.77        
cufflinks 0.011     Low Low
cufflinks 3.489       High
cufflinks 3.28       High
cufflinks 0.008     Low Low
cufflinks 3.336       High
cufflinks 0.008     Low Low

0 Strain