Gene : Glyma.05G248500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24058:SF23 - SERINE/THREONINE KINASE-RELATED Genomic Order:  2485
Name:  ? Glyma.05G248500 Secondary Identifier:  ? PAC:30526934
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G248500 0.5kb upstream 0.5kb upstream 12316 true Chr05: 42156380-42168695 Glycine max
Glyma.05G248500 0.5kb upstream 0.5kb upstream 500 false Chr05: 42156380-42156879 Glycine max
Glyma.05G248500 0.5kb downstream 0.5kb downstream 12316 true Chr05: 42156880-42169195 Glycine max
Glyma.05G248500 0.5kb downstream 0.5kb downstream 500 false Chr05: 42168696-42169195 Glycine max
Glyma.05G248500 1.0kb upstream 1.0kb upstream 12816 true Chr05: 42155880-42168695 Glycine max
Glyma.05G248500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42155880-42156879 Glycine max
Glyma.05G248500 1.0kb downstream 1.0kb downstream 12816 true Chr05: 42156880-42169695 Glycine max
Glyma.05G248500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42168696-42169695 Glycine max
Glyma.05G248500 2.0kb upstream 2.0kb upstream 13816 true Chr05: 42154880-42168695 Glycine max
Glyma.05G248500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42154880-42156879 Glycine max
Glyma.05G248500 2.0kb downstream 2.0kb downstream 13816 true Chr05: 42156880-42170695 Glycine max
Glyma.05G248500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42168696-42170695 Glycine max
Glyma.05G248500 5.0kb upstream 5.0kb upstream 16816 true Chr05: 42151880-42168695 Glycine max
Glyma.05G248500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42151880-42156879 Glycine max
Glyma.05G248500 5.0kb downstream 5.0kb downstream 16816 true Chr05: 42156880-42173695 Glycine max
Glyma.05G248500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42168696-42173695 Glycine max
Glyma.05G248500 10.0kb upstream 10.0kb upstream 21816 true Chr05: 42146880-42168695 Glycine max
Glyma.05G248500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42146880-42156879 Glycine max
Glyma.05G248500 10.0kb downstream 10.0kb downstream 21816 true Chr05: 42156880-42178695 Glycine max
Glyma.05G248500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42168696-42178695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254999 5265 Fabidae View MSA
124074554 5270 Rosid View MSA
123747831 5271 Pentapetalae View MSA
122793129 5272 Eudicot View MSA
122050754 5273 Angiosperm View MSA
121345925 5274 Embryophyte View MSA
123425693 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.89501 0.0 10.6008    
cufflinks 3.54132 0.0 9.69292   Low
cufflinks 3.53231 0.0 9.64253   Low
cufflinks 3.76843 0.0 10.2637    
cufflinks 3.88398 0.0 10.5807    
cufflinks 3.63302 0.0 9.92922    
cufflinks 4.4695 0.0 12.0818   High
cufflinks 3.94885 0.0 10.7283    
cufflinks 3.89283 0.0 10.5907    
cufflinks 1.556        
cufflinks 0.898       Low
cufflinks 1.725        
cufflinks 2.067       High
cufflinks 1.917        
cufflinks 1.035        
cufflinks 1.769        
cufflinks 0.839       Low
cufflinks 1.835        
cufflinks 2.182       High
cufflinks 1.848        
cufflinks 0.807       Low
cufflinks 1.849        
cufflinks 1.451        
cufflinks 1.035        
cufflinks 1.641        
cufflinks 0.698       Low

0 Strain