Gene : Glyma.05G248600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10314:SF79 - DOF-TYPE TRANSCRIPTION FACTOR TMO6 Genomic Order:  2486
Name:  ? Glyma.05G248600 Secondary Identifier:  ? PAC:30525564
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G248600 0.5kb upstream 0.5kb upstream 4114 true Chr05: 42179973-42184086 Glycine max
Glyma.05G248600 0.5kb upstream 0.5kb upstream 500 false Chr05: 42183587-42184086 Glycine max
Glyma.05G248600 0.5kb downstream 0.5kb downstream 4114 true Chr05: 42179473-42183586 Glycine max
Glyma.05G248600 0.5kb downstream 0.5kb downstream 500 false Chr05: 42179473-42179972 Glycine max
Glyma.05G248600 1.0kb upstream 1.0kb upstream 4614 true Chr05: 42179973-42184586 Glycine max
Glyma.05G248600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42183587-42184586 Glycine max
Glyma.05G248600 1.0kb downstream 1.0kb downstream 4614 true Chr05: 42178973-42183586 Glycine max
Glyma.05G248600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42178973-42179972 Glycine max
Glyma.05G248600 2.0kb upstream 2.0kb upstream 5614 true Chr05: 42179973-42185586 Glycine max
Glyma.05G248600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42183587-42185586 Glycine max
Glyma.05G248600 2.0kb downstream 2.0kb downstream 5614 true Chr05: 42177973-42183586 Glycine max
Glyma.05G248600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42177973-42179972 Glycine max
Glyma.05G248600 5.0kb upstream 5.0kb upstream 8614 true Chr05: 42179973-42188586 Glycine max
Glyma.05G248600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42183587-42188586 Glycine max
Glyma.05G248600 5.0kb downstream 5.0kb downstream 8614 true Chr05: 42174973-42183586 Glycine max
Glyma.05G248600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42174973-42179972 Glycine max
Glyma.05G248600 10.0kb upstream 10.0kb upstream 13614 true Chr05: 42179973-42193586 Glycine max
Glyma.05G248600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42183587-42193586 Glycine max
Glyma.05G248600 10.0kb downstream 10.0kb downstream 13614 true Chr05: 42169973-42183586 Glycine max
Glyma.05G248600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42169973-42179972 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305012 5265 Fabidae View MSA
124063138 5270 Rosid View MSA
123740733 5271 Pentapetalae View MSA
122789564 5272 Eudicot View MSA
122051131 5273 Angiosperm View MSA
121346707 5274 Embryophyte View MSA
123428019 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.7024 0.0 278.852 High  
cufflinks 36.461 0.0 145.509 High  
cufflinks 24.3878 0.0 106.803 High Low
cufflinks 63.3078 0.0 320.954 High  
cufflinks 51.5249 0.0 223.383 High  
cufflinks 30.9749 0.0 108.504 High  
cufflinks 114.733 0.0 662.504 High High
cufflinks 38.1553 0.0 173.659 High  
cufflinks 50.7993 0.0 213.818 High  
cufflinks 3.315        
cufflinks 1.52       Low
cufflinks 3.291        
cufflinks 2.728        
cufflinks 2.945        
cufflinks 3.775        
cufflinks 2.194        
cufflinks 2.403        
cufflinks 5.822       High
cufflinks 2.929        
cufflinks 4.41       High
cufflinks 1.929       Low
cufflinks 3.648        
cufflinks 2.466        
cufflinks 1.858       Low
cufflinks 3.001        
cufflinks 1.759       Low

0 Strain