Gene : Glyma.06G000100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE Genomic Order:  1
Name:  ? Glyma.06G000100 Secondary Identifier:  ? PAC:30552651
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G000100 0.5kb upstream 0.5kb upstream 13808 true Chr06: 1264-15071 Glycine max
Glyma.06G000100 0.5kb upstream 0.5kb upstream 500 false Chr06: 1264-1763 Glycine max
Glyma.06G000100 0.5kb downstream 0.5kb downstream 13808 true Chr06: 1764-15571 Glycine max
Glyma.06G000100 0.5kb downstream 0.5kb downstream 500 false Chr06: 15072-15571 Glycine max
Glyma.06G000100 1.0kb upstream 1.0kb upstream 14308 true Chr06: 764-15071 Glycine max
Glyma.06G000100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 764-1763 Glycine max
Glyma.06G000100 1.0kb downstream 1.0kb downstream 14308 true Chr06: 1764-16071 Glycine max
Glyma.06G000100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15072-16071 Glycine max
Glyma.06G000100 2.0kb upstream 2.0kb upstream 15071 true Chr06: 1-15071 Glycine max
Glyma.06G000100 2.0kb upstream 2.0kb upstream 1763 false Chr06: 1-1763 Glycine max
Glyma.06G000100 2.0kb downstream 2.0kb downstream 15308 true Chr06: 1764-17071 Glycine max
Glyma.06G000100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15072-17071 Glycine max
Glyma.06G000100 5.0kb upstream 5.0kb upstream 15071 true Chr06: 1-15071 Glycine max
Glyma.06G000100 5.0kb upstream 5.0kb upstream 1763 false Chr06: 1-1763 Glycine max
Glyma.06G000100 5.0kb downstream 5.0kb downstream 18308 true Chr06: 1764-20071 Glycine max
Glyma.06G000100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15072-20071 Glycine max
Glyma.06G000100 10.0kb upstream 10.0kb upstream 15071 true Chr06: 1-15071 Glycine max
Glyma.06G000100 10.0kb upstream 10.0kb upstream 1763 false Chr06: 1-1763 Glycine max
Glyma.06G000100 10.0kb downstream 10.0kb downstream 23308 true Chr06: 1764-25071 Glycine max
Glyma.06G000100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15072-25071 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304084 5265 Fabidae View MSA
124064781 5270 Rosid View MSA
123742951 5271 Pentapetalae View MSA
122788730 5272 Eudicot View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.39796 0.0 22.8512    
cufflinks 10.4316 0.0 28.0713    
cufflinks 8.19021 0.0 22.2756    
cufflinks 8.401 0.0 22.8482    
cufflinks 9.09435 0.0 24.636    
cufflinks 12.6034 0.0 33.7061   High
cufflinks 9.05806 0.0 24.5555    
cufflinks 9.10475 0.0 24.6492    
cufflinks 9.82336 0.0 26.4961    
cufflinks 1.668        
cufflinks 0.995       Low
cufflinks 1.566        
cufflinks 1.981        
cufflinks 2.335       High
cufflinks 1.292        
cufflinks 2.154        
cufflinks 1.107       Low
cufflinks 1.998        
cufflinks 2.394       High
cufflinks 2.067        
cufflinks 1.152       Low
cufflinks 2.011        
cufflinks 2.273       High
cufflinks 1.422        
cufflinks 2.005        
cufflinks 1.347        

0 Strain