Protein Family : histone deacetylase 1 123429001

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  245

245 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29791.t000022 (1 of 1) PTHR10625//PTHR10625:SF124 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 9 R. communis v0.1 5549   29791: 185364-190912
30147.t000157 (1 of 1) PTHR10625//PTHR10625:SF109 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 2 R. communis v0.1 4921   30147: 3128433-3133353
29659.t000004 (1 of 1) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED R. communis v0.1 5480   29659: 53655-59134
Cucsa.385280 (1 of 1) PTHR10625:SF124 - HISTONE DEACETYLASE 9 C. sativus v1.0 6616   scaffold03904: 632044-638659
Cucsa.120070 (1 of 2) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE C. sativus v1.0 4865   scaffold00998: 2030843-2035707
Cucsa.196560 (1 of 1) PTHR10625:SF109 - HISTONE DEACETYLASE 2 C. sativus v1.0 2981   scaffold01357: 185099-188079
orange1.1g041063m.g (1 of 3) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE C. sinensis v1.1 3179   scaffold00020: 645484-648662
orange1.1g010834m.g (1 of 3) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE C. sinensis v1.1 5136   scaffold00023: 1469351-1474486
orange1.1g013038m.g (1 of 1) PTHR10625:SF124 - HISTONE DEACETYLASE 9 C. sinensis v1.1 5896   scaffold00186: 224752-230647
AT4G38130 (1 of 1) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED A. thaliana TAIR10 HD1 3200   Chr4: 17896292-17899491
AT5G63110 (1 of 2) PTHR10625//PTHR10625:SF109 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 2 A. thaliana TAIR10 HDA6 2724   Chr5: 25315624-25318347
AT3G44680 (1 of 3) PTHR10625//PTHR10625:SF124 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 9 A. thaliana TAIR10 HDA9 3399   Chr3: 16226556-16229954
Thhalv10025146m.g (1 of 1) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE E. salsugineum v1.0 3015   scaffold_1: 8732-11746
Thhalv10002540m.g (1 of 1) PTHR10625:SF124 - HISTONE DEACETYLASE 9 E. salsugineum v1.0 3297   scaffold_4: 11597413-11600709
Thhalv10005608m.g (1 of 1) PTHR10625:SF109 - HISTONE DEACETYLASE 2 E. salsugineum v1.0 2395   scaffold_6: 1745548-1747942
Ciclev10028261m.g (1 of 3) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE C. clementina v1.0 5251   scaffold_8: 15350-20600
Ciclev10029823m.g (1 of 1) PTHR10625:SF124 - HISTONE DEACETYLASE 9 C. clementina v1.0 5485   scaffold_8: 20181632-20187116
Ciclev10020048m.g (1 of 3) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE C. clementina v1.0 3860   scaffold_3: 3502909-3506768
Lus10020570.g (1 of 2) PTHR10625:SF124 - HISTONE DEACETYLASE 9 L. usitatissimum v1.0 3604   scaffold77: 331510-335113
Lus10019486.g (1 of 2) PTHR10625:SF109 - HISTONE DEACETYLASE 2 L. usitatissimum v1.0 2897   scaffold906: 455689-458585
Lus10001356.g (1 of 2) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE L. usitatissimum v1.0 2875   scaffold926: 60078-62952
Gorai.002G014800 (1 of 2) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE G. raimondii v2.1 4422   Chr02: 957026-961447
Gorai.003G110100 (1 of 1) PTHR10625:SF109 - HISTONE DEACETYLASE 2 G. raimondii v2.1 4679   Chr03: 33848173-33852851
Gorai.005G215000 (1 of 2) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE G. raimondii v2.1 4497   Chr05: 59731660-59736156
e_gw1.8.107.1 (1 of 2) PTHR10625:SF109 - HISTONE DEACETYLASE 2 C. subellipsoidea C-169 v2.0 4363   scaffold_8: 63746-68108
estExt_Genemark1.C_80272 (1 of 2) PTHR10625:SF109 - HISTONE DEACETYLASE 2 C. subellipsoidea C-169 v2.0 5202   scaffold_8: 1541048-1546249
estExt_fgenesh1_pm.C_10292 (1 of 1) PTHR10625:SF124 - HISTONE DEACETYLASE 9 C. subellipsoidea C-169 v2.0 4877   scaffold_1: 3609922-3614798
MicpuC2.estExt_Genewise1Plus.C_20342 (1 of 1) PTHR10625:SF109 - HISTONE DEACETYLASE 2 M. pusilla CCMP1545 v3.0 2193   scaffold_2: 1250463-1252655
MicpuC2.estExt_Genewise1Plus.C_70462 (1 of 1) PTHR10625:SF124 - HISTONE DEACETYLASE 9 M. pusilla CCMP1545 v3.0 1739   scaffold_7: 850907-852645
e_gw2.03.216.1 (1 of 1) PTHR10625:SF109 - HISTONE DEACETYLASE 2 M. sp RCC299 v3.0 1709   Chr_03: 655294-657002

245 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29791.m000547 R. communis v0.1 123429001 histone deacetylase 1 3 5275 Viridiplantae
30147.m013886 R. communis v0.1 123429001 histone deacetylase 1 3 5275 Viridiplantae
orange1.1g013038m C. sinensis v1.1 123429001 histone deacetylase 1 3 5275 Viridiplantae
Thhalv10002540m E. salsugineum v1.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
Lus10020570 L. usitatissimum v1.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
Gorai.002G014800.1 G. raimondii v2.1 123429001 histone deacetylase 1 3 5275 Viridiplantae
34341 M. pusilla CCMP1545 v3.0 123429001 histone deacetylase 1 2 5275 Viridiplantae
31447 M. pusilla CCMP1545 v3.0 123429001 histone deacetylase 1 2 5275 Viridiplantae
66237 C. subellipsoidea C-169 v2.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
61177 M. sp RCC299 v3.0 123429001 histone deacetylase 1 2 5275 Viridiplantae
Thecc1EG041482t3 T. cacao v1.1 123429001 histone deacetylase 1 3 5275 Viridiplantae
Thecc1EG012179t1 T. cacao v1.1 123429001 histone deacetylase 1 3 5275 Viridiplantae
Cagra.1383s0002.1.p C. grandiflora v1.1 123429001 histone deacetylase 1 3 5275 Viridiplantae
Migut.D01991.1.p M. guttatus v2.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
Migut.C00330.1.p M. guttatus v2.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
Glyma.04G187000.1.p G. max Wm82.a2.v1 123429001 histone deacetylase 1 9 5275 Viridiplantae
Glyma.05G040600.1.p G. max Wm82.a2.v1 123429001 histone deacetylase 1 9 5275 Viridiplantae
Glyma.11G000300.1.p G. max Wm82.a2.v1 123429001 histone deacetylase 1 9 5275 Viridiplantae
Glyma.06G000100.1.p G. max Wm82.a2.v1 123429001 histone deacetylase 1 9 5275 Viridiplantae
Brara.A03767.1.p B. rapa FPsc v1.3 123429001 histone deacetylase 1 3 5275 Viridiplantae
Bostr.0556s0749.1.p B. stricta v1.2 123429001 histone deacetylase 1 3 5275 Viridiplantae
Bostr.0568s0496.1.p B. stricta v1.2 123429001 histone deacetylase 1 3 5275 Viridiplantae
Cre16.g673150.t1.2 C. reinhardtii v5.6 123429001 histone deacetylase 1 3 5275 Viridiplantae
Cre09.g387393.t1.1 C. reinhardtii v5.6 123429001 histone deacetylase 1 3 5275 Viridiplantae
SapurV1A.0131s0350.1.p S. purpurea v1.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
SapurV1A.0216s0350.1.p S. purpurea v1.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00083.14 A. trichopoda v1.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00040.176 A. trichopoda v1.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00009.154 A. trichopoda v1.0 123429001 histone deacetylase 1 3 5275 Viridiplantae
Traes_6AS_5CF7CCD9E.1 T. aestivum v2.2 123429001 histone deacetylase 1 4 5275 Viridiplantae