Gene : Gorai.005G215000 G. raimondii v2.1
Defline:  (1 of 2) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE Genomic Order:  2150
Name:  ? Gorai.005G215000 Secondary Identifier:  ? PAC:26805192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G215000 0.5kb upstream 0.5kb upstream 4997 true Chr05: 59731660-59736656 Gossypium raimondii
Gorai.005G215000 0.5kb upstream 0.5kb upstream 500 false Chr05: 59736157-59736656 Gossypium raimondii
Gorai.005G215000 0.5kb downstream 0.5kb downstream 4997 true Chr05: 59731160-59736156 Gossypium raimondii
Gorai.005G215000 0.5kb downstream 0.5kb downstream 500 false Chr05: 59731160-59731659 Gossypium raimondii
Gorai.005G215000 1.0kb upstream 1.0kb upstream 5497 true Chr05: 59731660-59737156 Gossypium raimondii
Gorai.005G215000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 59736157-59737156 Gossypium raimondii
Gorai.005G215000 1.0kb downstream 1.0kb downstream 5497 true Chr05: 59730660-59736156 Gossypium raimondii
Gorai.005G215000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 59730660-59731659 Gossypium raimondii
Gorai.005G215000 2.0kb upstream 2.0kb upstream 6497 true Chr05: 59731660-59738156 Gossypium raimondii
Gorai.005G215000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 59736157-59738156 Gossypium raimondii
Gorai.005G215000 2.0kb downstream 2.0kb downstream 6497 true Chr05: 59729660-59736156 Gossypium raimondii
Gorai.005G215000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 59729660-59731659 Gossypium raimondii
Gorai.005G215000 5.0kb upstream 5.0kb upstream 9497 true Chr05: 59731660-59741156 Gossypium raimondii
Gorai.005G215000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 59736157-59741156 Gossypium raimondii
Gorai.005G215000 5.0kb downstream 5.0kb downstream 9497 true Chr05: 59726660-59736156 Gossypium raimondii
Gorai.005G215000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 59726660-59731659 Gossypium raimondii
Gorai.005G215000 10.0kb upstream 10.0kb upstream 14497 true Chr05: 59731660-59746156 Gossypium raimondii
Gorai.005G215000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 59736157-59746156 Gossypium raimondii
Gorai.005G215000 10.0kb downstream 10.0kb downstream 14497 true Chr05: 59721660-59736156 Gossypium raimondii
Gorai.005G215000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 59721660-59731659 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807406 5264 Brassicales-Malvales Singleton cluster - no MSA
124304275 5266 SBM Singleton cluster - no MSA
124154824 5268 Malvidae Singleton cluster - no MSA
124064781 5270 Rosid View MSA
123742951 5271 Pentapetalae View MSA
122788730 5272 Eudicot View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain