Gene : Glyma.05G242800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18934:SF112 - DEA(D/H)-BOX RNA HELICASE FAMILY PROTEIN Genomic Order:  2428
Name:  ? Glyma.05G242800 Secondary Identifier:  ? PAC:30527181
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G242800 0.5kb upstream 0.5kb upstream 11346 true Chr05: 41764013-41775358 Glycine max
Glyma.05G242800 0.5kb upstream 0.5kb upstream 500 false Chr05: 41764013-41764512 Glycine max
Glyma.05G242800 0.5kb downstream 0.5kb downstream 11346 true Chr05: 41764513-41775858 Glycine max
Glyma.05G242800 0.5kb downstream 0.5kb downstream 500 false Chr05: 41775359-41775858 Glycine max
Glyma.05G242800 1.0kb upstream 1.0kb upstream 11846 true Chr05: 41763513-41775358 Glycine max
Glyma.05G242800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41763513-41764512 Glycine max
Glyma.05G242800 1.0kb downstream 1.0kb downstream 11846 true Chr05: 41764513-41776358 Glycine max
Glyma.05G242800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41775359-41776358 Glycine max
Glyma.05G242800 2.0kb upstream 2.0kb upstream 12846 true Chr05: 41762513-41775358 Glycine max
Glyma.05G242800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41762513-41764512 Glycine max
Glyma.05G242800 2.0kb downstream 2.0kb downstream 12846 true Chr05: 41764513-41777358 Glycine max
Glyma.05G242800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41775359-41777358 Glycine max
Glyma.05G242800 5.0kb upstream 5.0kb upstream 15846 true Chr05: 41759513-41775358 Glycine max
Glyma.05G242800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41759513-41764512 Glycine max
Glyma.05G242800 5.0kb downstream 5.0kb downstream 15846 true Chr05: 41764513-41780358 Glycine max
Glyma.05G242800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41775359-41780358 Glycine max
Glyma.05G242800 10.0kb upstream 10.0kb upstream 20846 true Chr05: 41754513-41775358 Glycine max
Glyma.05G242800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41754513-41764512 Glycine max
Glyma.05G242800 10.0kb downstream 10.0kb downstream 20846 true Chr05: 41764513-41785358 Glycine max
Glyma.05G242800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41775359-41785358 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306690 5265 Fabidae View MSA
124071978 5270 Rosid View MSA
123740465 5271 Pentapetalae View MSA
122787774 5272 Eudicot View MSA
122043243 5273 Angiosperm View MSA
121347422 5274 Embryophyte View MSA
123427408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.70898 0.0 24.5619    
cufflinks 5.02118 0.0 18.2975    
cufflinks 5.3962 0.0 19.759    
cufflinks 6.71444 0.0 24.0348    
cufflinks 4.68383 0.0 17.3599    
cufflinks 1.86492 0.0 7.36076   Low
cufflinks 8.89485 0.0 32.3148   High
cufflinks 4.12261 0.0 15.3454    
cufflinks 3.76956 0.0 14.7712    
cufflinks 0.932        
cufflinks 0.306       Low
cufflinks 1.609        
cufflinks 0.864        
cufflinks 1.142        
cufflinks 1.055        
cufflinks 2.15        
cufflinks 0.547       Low
cufflinks 1.882        
cufflinks 1.663        
cufflinks 2.487       High
cufflinks 0.499       Low
cufflinks 2.42       High
cufflinks 1.763        
cufflinks 0.453       Low
cufflinks 2.354       High
cufflinks 0.447       Low

0 Strain