Gene : Glyma.05G243400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23115//PTHR23115:SF133 - TRANSLATION FACTOR Genomic Order:  2434
Name:  ? Glyma.05G243400 Secondary Identifier:  ? PAC:30526180
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G243400 0.5kb upstream 0.5kb upstream 9235 true Chr05: 41800695-41809929 Glycine max
Glyma.05G243400 0.5kb upstream 0.5kb upstream 500 false Chr05: 41809430-41809929 Glycine max
Glyma.05G243400 0.5kb downstream 0.5kb downstream 9235 true Chr05: 41800195-41809429 Glycine max
Glyma.05G243400 0.5kb downstream 0.5kb downstream 500 false Chr05: 41800195-41800694 Glycine max
Glyma.05G243400 1.0kb upstream 1.0kb upstream 9735 true Chr05: 41800695-41810429 Glycine max
Glyma.05G243400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41809430-41810429 Glycine max
Glyma.05G243400 1.0kb downstream 1.0kb downstream 9735 true Chr05: 41799695-41809429 Glycine max
Glyma.05G243400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41799695-41800694 Glycine max
Glyma.05G243400 2.0kb upstream 2.0kb upstream 10735 true Chr05: 41800695-41811429 Glycine max
Glyma.05G243400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41809430-41811429 Glycine max
Glyma.05G243400 2.0kb downstream 2.0kb downstream 10735 true Chr05: 41798695-41809429 Glycine max
Glyma.05G243400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41798695-41800694 Glycine max
Glyma.05G243400 5.0kb upstream 5.0kb upstream 13735 true Chr05: 41800695-41814429 Glycine max
Glyma.05G243400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41809430-41814429 Glycine max
Glyma.05G243400 5.0kb downstream 5.0kb downstream 13735 true Chr05: 41795695-41809429 Glycine max
Glyma.05G243400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41795695-41800694 Glycine max
Glyma.05G243400 10.0kb upstream 10.0kb upstream 18735 true Chr05: 41800695-41819429 Glycine max
Glyma.05G243400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41809430-41819429 Glycine max
Glyma.05G243400 10.0kb downstream 10.0kb downstream 18735 true Chr05: 41790695-41809429 Glycine max
Glyma.05G243400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41790695-41800694 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308525 5265 Fabidae View MSA
124064938 5270 Rosid View MSA
123740720 5271 Pentapetalae View MSA
122785683 5272 Eudicot View MSA
122047327 5273 Angiosperm View MSA
121343812 5274 Embryophyte View MSA
123423812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.5475 0.0 253.185 High  
cufflinks 34.8157 0.0 163.277 High Low
cufflinks 40.0797 0.0 198.164 High  
cufflinks 40.1655 0.0 196.591 High  
cufflinks 55.4012 0.0 301.189 High High
cufflinks 43.541 0.0 196.696 High  
cufflinks 49.9672 0.0 241.071 High  
cufflinks 43.2108 0.0 216.563 High  
cufflinks 41.6432 0.0 206.684 High  
cufflinks 2.946        
cufflinks 2.37        
cufflinks 2.71        
cufflinks 4.651       High
cufflinks 5.88       High
cufflinks 2.142        
cufflinks 2.212        
cufflinks 2.083        
cufflinks 2.89        
cufflinks 2.668        
cufflinks 2.013        
cufflinks 2.844        
cufflinks 2.116        
cufflinks 2.268        
cufflinks 2.761        
cufflinks 2.137        
cufflinks 2.588        

0 Strain