Gene : Glyma.05G244200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR34056:SF1 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRC8 Genomic Order:  2442
Name:  ? Glyma.05G244200 Secondary Identifier:  ? PAC:30525876
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G244200 0.5kb upstream 0.5kb upstream 3474 true Chr05: 41863911-41867384 Glycine max
Glyma.05G244200 0.5kb upstream 0.5kb upstream 500 false Chr05: 41863911-41864410 Glycine max
Glyma.05G244200 0.5kb downstream 0.5kb downstream 3474 true Chr05: 41864411-41867884 Glycine max
Glyma.05G244200 0.5kb downstream 0.5kb downstream 500 false Chr05: 41867385-41867884 Glycine max
Glyma.05G244200 1.0kb upstream 1.0kb upstream 3974 true Chr05: 41863411-41867384 Glycine max
Glyma.05G244200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41863411-41864410 Glycine max
Glyma.05G244200 1.0kb downstream 1.0kb downstream 3974 true Chr05: 41864411-41868384 Glycine max
Glyma.05G244200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41867385-41868384 Glycine max
Glyma.05G244200 2.0kb upstream 2.0kb upstream 4974 true Chr05: 41862411-41867384 Glycine max
Glyma.05G244200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41862411-41864410 Glycine max
Glyma.05G244200 2.0kb downstream 2.0kb downstream 4974 true Chr05: 41864411-41869384 Glycine max
Glyma.05G244200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41867385-41869384 Glycine max
Glyma.05G244200 5.0kb upstream 5.0kb upstream 7974 true Chr05: 41859411-41867384 Glycine max
Glyma.05G244200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41859411-41864410 Glycine max
Glyma.05G244200 5.0kb downstream 5.0kb downstream 7974 true Chr05: 41864411-41872384 Glycine max
Glyma.05G244200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41867385-41872384 Glycine max
Glyma.05G244200 10.0kb upstream 10.0kb upstream 12974 true Chr05: 41854411-41867384 Glycine max
Glyma.05G244200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41854411-41864410 Glycine max
Glyma.05G244200 10.0kb downstream 10.0kb downstream 12974 true Chr05: 41864411-41877384 Glycine max
Glyma.05G244200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41867385-41877384 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310644 5265 Fabidae View MSA
124067453 5270 Rosid View MSA
123740304 5271 Pentapetalae View MSA
122789532 5272 Eudicot View MSA
122043438 5273 Angiosperm View MSA
121310125 5274 Embryophyte View MSA
123347699 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.31538 0.0 4.61396   Low
cufflinks 8.42096 0.0 23.4745    
cufflinks 1.31198 0.0 4.59955   Low
cufflinks 25.3633 0.0 67.774 High High
cufflinks 8.18695 0.0 22.8736    
cufflinks 2.13347 0.0 7.10825    
cufflinks 25.7802 0.0 68.8975 High High
cufflinks 29.0302 0.0 77.9126 High High
cufflinks 6.10733 0.0 17.6021    
cufflinks 9.212     High High
cufflinks 0.097       Low
cufflinks 1.8        
cufflinks 2.127        
cufflinks 4.104        
cufflinks 0.589        
cufflinks 3.467        
cufflinks 0.779        
cufflinks 4.041        
cufflinks 3.625        
cufflinks 3.833        
cufflinks 0.403       Low
cufflinks 3.423        
cufflinks 8.094     High High
cufflinks 0.15       Low
cufflinks 2.632        
cufflinks 0.451        

0 Strain