Gene : Glyma.05G245500 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11467//PTHR11467:SF33 - HISTONE H1/H5 Genomic Order:  2455
Name:  ? Glyma.05G245500 Secondary Identifier:  ? PAC:30523758
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G245500 0.5kb upstream 0.5kb upstream 3601 true Chr05: 41945440-41949040 Glycine max
Glyma.05G245500 0.5kb upstream 0.5kb upstream 500 false Chr05: 41948541-41949040 Glycine max
Glyma.05G245500 0.5kb downstream 0.5kb downstream 3601 true Chr05: 41944940-41948540 Glycine max
Glyma.05G245500 0.5kb downstream 0.5kb downstream 500 false Chr05: 41944940-41945439 Glycine max
Glyma.05G245500 1.0kb upstream 1.0kb upstream 4101 true Chr05: 41945440-41949540 Glycine max
Glyma.05G245500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41948541-41949540 Glycine max
Glyma.05G245500 1.0kb downstream 1.0kb downstream 4101 true Chr05: 41944440-41948540 Glycine max
Glyma.05G245500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41944440-41945439 Glycine max
Glyma.05G245500 2.0kb upstream 2.0kb upstream 5101 true Chr05: 41945440-41950540 Glycine max
Glyma.05G245500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41948541-41950540 Glycine max
Glyma.05G245500 2.0kb downstream 2.0kb downstream 5101 true Chr05: 41943440-41948540 Glycine max
Glyma.05G245500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41943440-41945439 Glycine max
Glyma.05G245500 5.0kb upstream 5.0kb upstream 8101 true Chr05: 41945440-41953540 Glycine max
Glyma.05G245500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41948541-41953540 Glycine max
Glyma.05G245500 5.0kb downstream 5.0kb downstream 8101 true Chr05: 41940440-41948540 Glycine max
Glyma.05G245500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41940440-41945439 Glycine max
Glyma.05G245500 10.0kb upstream 10.0kb upstream 13101 true Chr05: 41945440-41958540 Glycine max
Glyma.05G245500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41948541-41958540 Glycine max
Glyma.05G245500 10.0kb downstream 10.0kb downstream 13101 true Chr05: 41935440-41948540 Glycine max
Glyma.05G245500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41935440-41945439 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029847 5273 Angiosperm View MSA
122311965 5265 Fabidae View MSA
124072577 5270 Rosid View MSA
123747528 5271 Pentapetalae View MSA
122795088 5272 Eudicot View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.3172 0.0 110.035 High High
cufflinks 24.6782 0.0 84.5382 High  
cufflinks 30.6156 0.0 106.798 High High
cufflinks 17.0695 0.0 59.101   Low
cufflinks 26.1694 0.0 91.2169 High  
cufflinks 18.8331 0.0 64.0667    
cufflinks 27.7144 0.0 96.8315 High  
cufflinks 17.1962 0.0 58.9143   Low
cufflinks 19.9261 0.0 67.8623 High  
cufflinks 3.952       Low
cufflinks 7.525     High High
cufflinks 4.097       Low
cufflinks 4.55        
cufflinks 5.047        
cufflinks 5.558     High  
cufflinks 7.052        
cufflinks 4.301       Low
cufflinks 3.499       Low
cufflinks 6.379        
cufflinks 7.293     High High
cufflinks 6.703     High  
cufflinks 6.679        
cufflinks 6.729        
cufflinks 6.859     High  
cufflinks 6.518        
cufflinks 4.8        

0 Strain