Gene : Glyma.05G246700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11102:SF84 - HCP-like superfamily protein-related Genomic Order:  2467
Name:  ? Glyma.05G246700 Secondary Identifier:  ? PAC:30526157
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G246700 0.5kb upstream 0.5kb upstream 3649 true Chr05: 42018718-42022366 Glycine max
Glyma.05G246700 0.5kb upstream 0.5kb upstream 500 false Chr05: 42021867-42022366 Glycine max
Glyma.05G246700 0.5kb downstream 0.5kb downstream 3649 true Chr05: 42018218-42021866 Glycine max
Glyma.05G246700 0.5kb downstream 0.5kb downstream 500 false Chr05: 42018218-42018717 Glycine max
Glyma.05G246700 1.0kb upstream 1.0kb upstream 4149 true Chr05: 42018718-42022866 Glycine max
Glyma.05G246700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42021867-42022866 Glycine max
Glyma.05G246700 1.0kb downstream 1.0kb downstream 4149 true Chr05: 42017718-42021866 Glycine max
Glyma.05G246700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42017718-42018717 Glycine max
Glyma.05G246700 2.0kb upstream 2.0kb upstream 5149 true Chr05: 42018718-42023866 Glycine max
Glyma.05G246700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42021867-42023866 Glycine max
Glyma.05G246700 2.0kb downstream 2.0kb downstream 5149 true Chr05: 42016718-42021866 Glycine max
Glyma.05G246700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42016718-42018717 Glycine max
Glyma.05G246700 5.0kb upstream 5.0kb upstream 8149 true Chr05: 42018718-42026866 Glycine max
Glyma.05G246700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42021867-42026866 Glycine max
Glyma.05G246700 5.0kb downstream 5.0kb downstream 8149 true Chr05: 42013718-42021866 Glycine max
Glyma.05G246700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42013718-42018717 Glycine max
Glyma.05G246700 10.0kb upstream 10.0kb upstream 13149 true Chr05: 42018718-42031866 Glycine max
Glyma.05G246700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42021867-42031866 Glycine max
Glyma.05G246700 10.0kb downstream 10.0kb downstream 13149 true Chr05: 42008718-42021866 Glycine max
Glyma.05G246700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42008718-42018717 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299541 5265 Fabidae View MSA
124065958 5270 Rosid View MSA
123743984 5271 Pentapetalae View MSA
122786956 5272 Eudicot View MSA
122044163 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121346808 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4858 0.0 39.2303    
cufflinks 6.29689 0.0 22.5827    
cufflinks 8.83882 0.0 30.9133    
cufflinks 19.134 0.0 67.9999   High
cufflinks 8.98169 0.0 30.8729    
cufflinks 7.32973 0.0 25.5522    
cufflinks 34.7392 0.0 139.995 High High
cufflinks 6.96742 0.0 24.6159    
cufflinks 10.0394 0.0 34.6278    
cufflinks 2.367       Low
cufflinks 5.944     High High
cufflinks 4.062        
cufflinks 2.773       Low
cufflinks 2.725       Low
cufflinks 5.348     High  
cufflinks 5.022        
cufflinks 2.231       Low
cufflinks 3.563        
cufflinks 3.734        
cufflinks 4.807        
cufflinks 6.303     High High
cufflinks 4.742        
cufflinks 3.159        
cufflinks 6.1     High High
cufflinks 4.656        
cufflinks 3.76        

0 Strain