Gene : Glyma.06G041400 G. max Wm82.a2.v1
Defline:  (1 of 152) PF02458 - Transferase family (Transferase) Genomic Order:  414
Name:  ? Glyma.06G041400 Secondary Identifier:  ? PAC:30549501
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-361 Glycine max pathologic  
Gmax PWY-6040 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G041400 0.5kb upstream 0.5kb upstream 4226 true Chr06: 3132564-3136789 Glycine max
Glyma.06G041400 0.5kb upstream 0.5kb upstream 500 false Chr06: 3136290-3136789 Glycine max
Glyma.06G041400 0.5kb downstream 0.5kb downstream 4226 true Chr06: 3132064-3136289 Glycine max
Glyma.06G041400 0.5kb downstream 0.5kb downstream 500 false Chr06: 3132064-3132563 Glycine max
Glyma.06G041400 1.0kb upstream 1.0kb upstream 4726 true Chr06: 3132564-3137289 Glycine max
Glyma.06G041400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3136290-3137289 Glycine max
Glyma.06G041400 1.0kb downstream 1.0kb downstream 4726 true Chr06: 3131564-3136289 Glycine max
Glyma.06G041400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3131564-3132563 Glycine max
Glyma.06G041400 2.0kb upstream 2.0kb upstream 5726 true Chr06: 3132564-3138289 Glycine max
Glyma.06G041400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3136290-3138289 Glycine max
Glyma.06G041400 2.0kb downstream 2.0kb downstream 5726 true Chr06: 3130564-3136289 Glycine max
Glyma.06G041400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3130564-3132563 Glycine max
Glyma.06G041400 5.0kb upstream 5.0kb upstream 8726 true Chr06: 3132564-3141289 Glycine max
Glyma.06G041400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3136290-3141289 Glycine max
Glyma.06G041400 5.0kb downstream 5.0kb downstream 8726 true Chr06: 3127564-3136289 Glycine max
Glyma.06G041400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3127564-3132563 Glycine max
Glyma.06G041400 10.0kb upstream 10.0kb upstream 13726 true Chr06: 3132564-3146289 Glycine max
Glyma.06G041400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3136290-3146289 Glycine max
Glyma.06G041400 10.0kb downstream 10.0kb downstream 13726 true Chr06: 3122564-3136289 Glycine max
Glyma.06G041400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3122564-3132563 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239656 5265 Fabidae Singleton cluster - no MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.35977 0.0 15.4366    
cufflinks 1.84118 0.0 6.14221    
cufflinks 0.976985 0.0 3.46645   Low
cufflinks 2.51993 0.0 8.04025    
cufflinks 10.3054 0.0 27.9289   High
cufflinks 7.38067 0.0 20.5119    
cufflinks 3.9189 0.0 11.7323    
cufflinks 3.07959 0.0 9.52298    
cufflinks 11.2225 0.0 30.291   High
cufflinks 0.385       Low
cufflinks 6.263     High High
cufflinks 0.327       Low
cufflinks 2.996        
cufflinks 3.021        
cufflinks 4.055        
cufflinks 1.784        
cufflinks 2.046        
cufflinks 0.327       Low
cufflinks 0.579       Low
cufflinks 2.318        
cufflinks 5.818     High High
cufflinks 2.629        
cufflinks 1.367        
cufflinks 5.804       High
cufflinks 2.288        
cufflinks 6.607     High High

0 Strain