Gene : Glyma.06G024900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12081:SF51 - TRANSCRIPTION FACTOR E2FC Genomic Order:  249
Name:  ? Glyma.06G024900 Secondary Identifier:  ? PAC:30554165
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G024900 0.5kb upstream 0.5kb upstream 4445 true Chr06: 1862508-1866952 Glycine max
Glyma.06G024900 0.5kb upstream 0.5kb upstream 500 false Chr06: 1862508-1863007 Glycine max
Glyma.06G024900 0.5kb downstream 0.5kb downstream 4445 true Chr06: 1863008-1867452 Glycine max
Glyma.06G024900 0.5kb downstream 0.5kb downstream 500 false Chr06: 1866953-1867452 Glycine max
Glyma.06G024900 1.0kb upstream 1.0kb upstream 4945 true Chr06: 1862008-1866952 Glycine max
Glyma.06G024900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1862008-1863007 Glycine max
Glyma.06G024900 1.0kb downstream 1.0kb downstream 4945 true Chr06: 1863008-1867952 Glycine max
Glyma.06G024900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1866953-1867952 Glycine max
Glyma.06G024900 2.0kb upstream 2.0kb upstream 5945 true Chr06: 1861008-1866952 Glycine max
Glyma.06G024900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1861008-1863007 Glycine max
Glyma.06G024900 2.0kb downstream 2.0kb downstream 5945 true Chr06: 1863008-1868952 Glycine max
Glyma.06G024900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1866953-1868952 Glycine max
Glyma.06G024900 5.0kb upstream 5.0kb upstream 8945 true Chr06: 1858008-1866952 Glycine max
Glyma.06G024900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1858008-1863007 Glycine max
Glyma.06G024900 5.0kb downstream 5.0kb downstream 8945 true Chr06: 1863008-1871952 Glycine max
Glyma.06G024900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1866953-1871952 Glycine max
Glyma.06G024900 10.0kb upstream 10.0kb upstream 13945 true Chr06: 1853008-1866952 Glycine max
Glyma.06G024900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1853008-1863007 Glycine max
Glyma.06G024900 10.0kb downstream 10.0kb downstream 13945 true Chr06: 1863008-1876952 Glycine max
Glyma.06G024900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1866953-1876952 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792207 5273 Angiosperm View MSA
122305494 5265 Fabidae View MSA
124061286 5270 Rosid View MSA
123738589 5271 Pentapetalae View MSA
122796961 5272 Eudicot View MSA
121063453 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.254136 0.0 1.2317   Low
cufflinks 1.84395 0.0 10.8007    
cufflinks 1.19372 0.0 7.82801    
cufflinks 1.71176 0.0 8.71634    
cufflinks 4.77432 0.0 20.6021   High
cufflinks 2.26708 0.0 12.8599    
cufflinks 1.74464 0.0 10.7043    
cufflinks 1.59613 0.0 9.8486    
cufflinks 2.44716 0.0 13.4741    
cufflinks 0.208        
cufflinks 0.084        
cufflinks 0.312        
cufflinks 0.843       High
cufflinks 1.333       High
cufflinks 0.201        
cufflinks 0.115        
cufflinks 0.048     Low Low
cufflinks 0.454       High
cufflinks 0.432        
cufflinks 0.086     Low  
cufflinks 0.137        
cufflinks 0.107        
cufflinks 0.129        
cufflinks 0.109        
cufflinks 0.068     Low Low
cufflinks 0.149        

0 Strain