Gene : Glyma.06G068700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR18896:SF11 - PHOSPHOLIPASE D ALPHA 1-RELATED Genomic Order:  687
Name:  ? Glyma.06G068700 Secondary Identifier:  ? PAC:30552432
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  
Gmax PWY-3561 Glycine max pathologic  
Gmax PWY-7039 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G068700 0.5kb upstream 0.5kb upstream 5207 true Chr06: 5264111-5269317 Glycine max
Glyma.06G068700 0.5kb upstream 0.5kb upstream 500 false Chr06: 5268818-5269317 Glycine max
Glyma.06G068700 0.5kb downstream 0.5kb downstream 5207 true Chr06: 5263611-5268817 Glycine max
Glyma.06G068700 0.5kb downstream 0.5kb downstream 500 false Chr06: 5263611-5264110 Glycine max
Glyma.06G068700 1.0kb upstream 1.0kb upstream 5707 true Chr06: 5264111-5269817 Glycine max
Glyma.06G068700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5268818-5269817 Glycine max
Glyma.06G068700 1.0kb downstream 1.0kb downstream 5707 true Chr06: 5263111-5268817 Glycine max
Glyma.06G068700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5263111-5264110 Glycine max
Glyma.06G068700 2.0kb upstream 2.0kb upstream 6707 true Chr06: 5264111-5270817 Glycine max
Glyma.06G068700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5268818-5270817 Glycine max
Glyma.06G068700 2.0kb downstream 2.0kb downstream 6707 true Chr06: 5262111-5268817 Glycine max
Glyma.06G068700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5262111-5264110 Glycine max
Glyma.06G068700 5.0kb upstream 5.0kb upstream 9707 true Chr06: 5264111-5273817 Glycine max
Glyma.06G068700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5268818-5273817 Glycine max
Glyma.06G068700 5.0kb downstream 5.0kb downstream 9707 true Chr06: 5259111-5268817 Glycine max
Glyma.06G068700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5259111-5264110 Glycine max
Glyma.06G068700 10.0kb upstream 10.0kb upstream 14707 true Chr06: 5264111-5278817 Glycine max
Glyma.06G068700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5268818-5278817 Glycine max
Glyma.06G068700 10.0kb downstream 10.0kb downstream 14707 true Chr06: 5254111-5268817 Glycine max
Glyma.06G068700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5254111-5264110 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780184 5273 Angiosperm View MSA
122296230 5265 Fabidae View MSA
124050775 5270 Rosid View MSA
123745391 5271 Pentapetalae View MSA
122771485 5272 Eudicot View MSA
121051807 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.332858 0.0 1.22653    
cufflinks 0.279688 0.0 1.04013    
cufflinks 0.580071 0.0 2.05943    
cufflinks 0.208216 0.0 0.784473    
cufflinks 0.455402 0.0 1.64826    
cufflinks 0.17322 0.0 0.658315 Low  
cufflinks 0.0339712 0.0 0.137802 Low Low
cufflinks 0.507686 0.0 1.82213    
cufflinks 0.625788 0.0 2.21394    
cufflinks 1.241       High
cufflinks 0.61        
cufflinks 0.444        
cufflinks 1.326       High
cufflinks 0.335        
cufflinks 0.058       Low
cufflinks 0.385        
cufflinks 0.411        
cufflinks 0.898        
cufflinks 0.202       Low
cufflinks 0.47        
cufflinks 0.608        
cufflinks 0.564        
cufflinks 0.213        
cufflinks 0.318        
cufflinks 0.479        
cufflinks 0.728        

0 Strain