Gene : Glyma.06G068900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23079:SF1 - PROTEIN RRF-3 Genomic Order:  689
Name:  ? Glyma.06G068900 Secondary Identifier:  ? PAC:30550718
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G068900 0.5kb upstream 0.5kb upstream 6650 true Chr06: 5282137-5288786 Glycine max
Glyma.06G068900 0.5kb upstream 0.5kb upstream 500 false Chr06: 5288287-5288786 Glycine max
Glyma.06G068900 0.5kb downstream 0.5kb downstream 6650 true Chr06: 5281637-5288286 Glycine max
Glyma.06G068900 0.5kb downstream 0.5kb downstream 500 false Chr06: 5281637-5282136 Glycine max
Glyma.06G068900 1.0kb upstream 1.0kb upstream 7150 true Chr06: 5282137-5289286 Glycine max
Glyma.06G068900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5288287-5289286 Glycine max
Glyma.06G068900 1.0kb downstream 1.0kb downstream 7150 true Chr06: 5281137-5288286 Glycine max
Glyma.06G068900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5281137-5282136 Glycine max
Glyma.06G068900 2.0kb upstream 2.0kb upstream 8150 true Chr06: 5282137-5290286 Glycine max
Glyma.06G068900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5288287-5290286 Glycine max
Glyma.06G068900 2.0kb downstream 2.0kb downstream 8150 true Chr06: 5280137-5288286 Glycine max
Glyma.06G068900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5280137-5282136 Glycine max
Glyma.06G068900 5.0kb upstream 5.0kb upstream 11150 true Chr06: 5282137-5293286 Glycine max
Glyma.06G068900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5288287-5293286 Glycine max
Glyma.06G068900 5.0kb downstream 5.0kb downstream 11150 true Chr06: 5277137-5288286 Glycine max
Glyma.06G068900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5277137-5282136 Glycine max
Glyma.06G068900 10.0kb upstream 10.0kb upstream 16150 true Chr06: 5282137-5298286 Glycine max
Glyma.06G068900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5288287-5298286 Glycine max
Glyma.06G068900 10.0kb downstream 10.0kb downstream 16150 true Chr06: 5272137-5288286 Glycine max
Glyma.06G068900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5272137-5282136 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303620 5265 Fabidae View MSA
124063849 5270 Rosid View MSA
123737046 5271 Pentapetalae View MSA
122789317 5272 Eudicot View MSA
122045596 5273 Angiosperm View MSA
121346387 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.13973 0.0 15.4476    
cufflinks 5.43021 0.0 18.6891    
cufflinks 4.61594 0.0 18.1052    
cufflinks 5.99604 0.0 22.9059   High
cufflinks 4.09205 0.0 12.5859    
cufflinks 3.69091 0.0 13.2575   Low
cufflinks 6.81512 0.0 23.5724   High
cufflinks 4.96234 0.0 17.2339    
cufflinks 4.33237 0.0 16.99    
cufflinks 1.185        
cufflinks 0.118       Low
cufflinks 1.416        
cufflinks 1.613        
cufflinks 1.399        
cufflinks 0.168       Low
cufflinks 1.453        
cufflinks 0.347        
cufflinks 1.91        
cufflinks 1.932        
cufflinks 1.261        
cufflinks 0.231       Low
cufflinks 1.737        
cufflinks 1.472        
cufflinks 0.208       Low
cufflinks 1.281        
cufflinks 0.491        

0 Strain