Gene : Glyma.06G061600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED Genomic Order:  616
Name:  ? Glyma.06G061600 Secondary Identifier:  ? PAC:30552505
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G061600 0.5kb upstream 0.5kb upstream 6166 true Chr06: 4636298-4642463 Glycine max
Glyma.06G061600 0.5kb upstream 0.5kb upstream 500 false Chr06: 4641964-4642463 Glycine max
Glyma.06G061600 0.5kb downstream 0.5kb downstream 6166 true Chr06: 4635798-4641963 Glycine max
Glyma.06G061600 0.5kb downstream 0.5kb downstream 500 false Chr06: 4635798-4636297 Glycine max
Glyma.06G061600 1.0kb upstream 1.0kb upstream 6666 true Chr06: 4636298-4642963 Glycine max
Glyma.06G061600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4641964-4642963 Glycine max
Glyma.06G061600 1.0kb downstream 1.0kb downstream 6666 true Chr06: 4635298-4641963 Glycine max
Glyma.06G061600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4635298-4636297 Glycine max
Glyma.06G061600 2.0kb upstream 2.0kb upstream 7666 true Chr06: 4636298-4643963 Glycine max
Glyma.06G061600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4641964-4643963 Glycine max
Glyma.06G061600 2.0kb downstream 2.0kb downstream 7666 true Chr06: 4634298-4641963 Glycine max
Glyma.06G061600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4634298-4636297 Glycine max
Glyma.06G061600 5.0kb upstream 5.0kb upstream 10666 true Chr06: 4636298-4646963 Glycine max
Glyma.06G061600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4641964-4646963 Glycine max
Glyma.06G061600 5.0kb downstream 5.0kb downstream 10666 true Chr06: 4631298-4641963 Glycine max
Glyma.06G061600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4631298-4636297 Glycine max
Glyma.06G061600 10.0kb upstream 10.0kb upstream 15666 true Chr06: 4636298-4651963 Glycine max
Glyma.06G061600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4641964-4651963 Glycine max
Glyma.06G061600 10.0kb downstream 10.0kb downstream 15666 true Chr06: 4626298-4641963 Glycine max
Glyma.06G061600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4626298-4636297 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041349 5273 Angiosperm View MSA
122304466 5265 Fabidae View MSA
124060489 5270 Rosid View MSA
123745047 5271 Pentapetalae View MSA
122791134 5272 Eudicot View MSA
121350005 5274 Embryophyte View MSA
123428402 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.7399 0.0 5.09912   Low
cufflinks 11.3592 0.0 30.6899    
cufflinks 2.76375 0.0 7.68512    
cufflinks 11.1849 0.0 30.2143    
cufflinks 5.8759 0.0 15.6958    
cufflinks 2.63224 0.0 7.35344    
cufflinks 43.5258 0.0 139.195 High High
cufflinks 6.79525 0.0 18.1291    
cufflinks 7.27549 0.0 19.4129    
cufflinks 3.813        
cufflinks 0.279       Low
cufflinks 4.746        
cufflinks 4.131        
cufflinks 5.071        
cufflinks 2.738        
cufflinks 3.018        
cufflinks 0.752        
cufflinks 6.219        
cufflinks 12.291     High High
cufflinks 2.183        
cufflinks 0.428       Low
cufflinks 3.07        
cufflinks 4.4        
cufflinks 0.24       Low
cufflinks 2.783        
cufflinks 1.003        

0 Strain