Protein Family : DNA-directed RNA polymerase family protein 123428402

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  156

156 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
92553 (1 of 1) PF00562//PF04560//PF04566//PF04567 - RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) // RNA polymerase Rpb2, domain 7 (RNA_pol_Rpb2_7) // RNA polymerase Rpb2, domain 4 (RNA_pol_Rpb2_4) // RNA polymerase Rpb2, domain 5 (RNA_pol_Rpb2_5) S. moellendorffii v1.0 1868   scaffold_13: 2518409-2520276
118653 (1 of 1) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED S. moellendorffii v1.0 2454   scaffold_59: 1023436-1025889
29848.t000096 (1 of 1) K16252 - DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] (NRPD2, NRPE2) R. communis v0.1 5184   29848: 495887-501070
29851.t000054 (1 of 1) K03010 - DNA-directed RNA polymerase II subunit RPB2 (RPB2, POLR2B) R. communis v0.1 8296   29851: 307279-315574
Cucsa.046200 (1 of 1) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 C. sativus v1.0 8582   scaffold00542: 1777940-1786521
Cucsa.271520 (1 of 1) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED C. sativus v1.0 8473   scaffold02500: 350140-358612
orange1.1g001050m.g (1 of 2) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED C. sinensis v1.1 6534   scaffold00162: 133602-140135
orange1.1g000996m.g (1 of 2) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 C. sinensis v1.1 9516   scaffold00450: 112058-121573
AT4G21710 (1 of 1) K03010 - DNA-directed RNA polymerase II subunit RPB2 (RPB2, POLR2B) A. thaliana TAIR10 NRPB2 6744   Chr4: 11535525-11542268
AT3G23780 (1 of 2) K16252 - DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] (NRPD2, NRPE2) A. thaliana TAIR10 NRPD2A 6485   Chr3: 8567725-8574209
Thhalv10024251m.g (1 of 1) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 E. salsugineum v1.0 6684   scaffold_1: 7913227-7919910
Thhalv10019931m.g (1 of 1) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED E. salsugineum v1.0 5262   scaffold_13: 3097508-3102769
Ciclev10027701m.g (1 of 1) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 C. clementina v1.0 9465   scaffold_8: 7977806-7987270
Ciclev10018562m.g (1 of 1) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED C. clementina v1.0 7666   scaffold_3: 37103738-37111403
Lus10011182.g (1 of 2) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 L. usitatissimum v1.0 6672   scaffold1376: 47409-54080
Lus10039677.g (1 of 2) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED L. usitatissimum v1.0 5037   scaffold15: 1135227-1140263
Lus10027166.g (1 of 2) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED L. usitatissimum v1.0 5003   scaffold472: 89455-94457
Lus10015446.g (1 of 2) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 L. usitatissimum v1.0 6577   scaffold635: 571689-578265
Gorai.001G037900 (1 of 1) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED G. raimondii v2.1 6063   Chr01: 3537850-3543912
Gorai.010G255400 (1 of 1) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 G. raimondii v2.1 8294   Chr10: 62034290-62042583
estExt_fgenesh1_pm.C_210051 (1 of 1) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 C. subellipsoidea C-169 v2.0 10239   scaffold_21: 776990-787228
MicpuC2.estExt_Genewise1Plus.C_20588 (1 of 1) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 M. pusilla CCMP1545 v3.0 3936   scaffold_2: 699040-702975
estExt_Genewise2Plus.C_Chr_030493 (1 of 1) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 M. sp RCC299 v3.0 3804   Chr_03: 808814-812617
fgenesh1_pg.C_Chr_1000133 (1 of 1) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 O. lucimarinus v2.0 3926   Chr_1: 297186-301111
Thecc1EG029879 (1 of 1) K03010 - DNA-directed RNA polymerase II subunit RPB2 (RPB2, POLR2B) T. cacao v1.1 8338   scaffold_6: 24746130-24754467
Thecc1EG036908 (1 of 1) K16252 - DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] (NRPD2, NRPE2) T. cacao v1.1 8104   scaffold_9: 790099-798202
Migut.E01463 (1 of 1) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED M. guttatus v2.0 7721   scaffold_5: 17474935-17482655
Migut.H01489 (1 of 2) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 M. guttatus v2.0 7022   scaffold_8: 16320493-16327514
Araha.6678s0008 (1 of 2) PTHR20856:SF7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 A. halleri v1.1 6937   Scaffold6678: 30434-37370
Cagra.0104s0002 (1 of 1) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED C. grandiflora v1.1 5769   Scaffold104: 3926-9694

156 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
92553 S. moellendorffii v1.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
118653 S. moellendorffii v1.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
29848.m004540 R. communis v0.1 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
29851.m002412 R. communis v0.1 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Cucsa.046200.1 C. sativus v1.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Cucsa.271520.1 C. sativus v1.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
orange1.1g000996m C. sinensis v1.1 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
orange1.1g001050m C. sinensis v1.1 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
AT4G21710.1 A. thaliana TAIR10 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
AT3G23780.1 A. thaliana TAIR10 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Thhalv10024251m E. salsugineum v1.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Thhalv10019931m E. salsugineum v1.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Ciclev10027701m C. clementina v1.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Ciclev10018562m C. clementina v1.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Lus10015446 L. usitatissimum v1.0 123428402 DNA-directed RNA polymerase family protein 4 5275 Viridiplantae
Lus10011182 L. usitatissimum v1.0 123428402 DNA-directed RNA polymerase family protein 4 5275 Viridiplantae
Lus10039677 L. usitatissimum v1.0 123428402 DNA-directed RNA polymerase family protein 4 5275 Viridiplantae
Lus10027166 L. usitatissimum v1.0 123428402 DNA-directed RNA polymerase family protein 4 5275 Viridiplantae
Gorai.001G037900.1 G. raimondii v2.1 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Gorai.010G255400.1 G. raimondii v2.1 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
54821 C. subellipsoidea C-169 v2.0 123428402 DNA-directed RNA polymerase family protein 1 5275 Viridiplantae
31670 M. pusilla CCMP1545 v3.0 123428402 DNA-directed RNA polymerase family protein 1 5275 Viridiplantae
93697 M. sp RCC299 v3.0 123428402 DNA-directed RNA polymerase family protein 1 5275 Viridiplantae
13673 O. lucimarinus v2.0 123428402 DNA-directed RNA polymerase family protein 1 5275 Viridiplantae
Thecc1EG029879t1 T. cacao v1.1 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Thecc1EG036908t1 T. cacao v1.1 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Migut.E01463.1.p M. guttatus v2.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Migut.H01489.1.p M. guttatus v2.0 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae
Araha.6678s0008.1.p A. halleri v1.1 123428402 DNA-directed RNA polymerase family protein 1 5275 Viridiplantae
Cagra.0104s0002.1.p C. grandiflora v1.1 123428402 DNA-directed RNA polymerase family protein 2 5275 Viridiplantae