Gene : NRPB2 A. thaliana TAIR10
Primary Identifier:  ? AT4G21710 Defline:  (1 of 1) K03010 - DNA-directed RNA polymerase II subunit RPB2 (RPB2, POLR2B)
Genomic Order:  2128 Name:  ? AT4G21710
Secondary Identifier:  ? PAC:19648510
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21710 0.5kb upstream 0.5kb upstream 7244 true Chr4: 11535525-11542768 Arabidopsis thaliana
AT4G21710 0.5kb upstream 0.5kb upstream 500 false Chr4: 11542269-11542768 Arabidopsis thaliana
AT4G21710 0.5kb downstream 0.5kb downstream 7244 true Chr4: 11535025-11542268 Arabidopsis thaliana
AT4G21710 0.5kb downstream 0.5kb downstream 500 false Chr4: 11535025-11535524 Arabidopsis thaliana
AT4G21710 1.0kb upstream 1.0kb upstream 7744 true Chr4: 11535525-11543268 Arabidopsis thaliana
AT4G21710 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11542269-11543268 Arabidopsis thaliana
AT4G21710 1.0kb downstream 1.0kb downstream 7744 true Chr4: 11534525-11542268 Arabidopsis thaliana
AT4G21710 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11534525-11535524 Arabidopsis thaliana
AT4G21710 2.0kb upstream 2.0kb upstream 8744 true Chr4: 11535525-11544268 Arabidopsis thaliana
AT4G21710 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11542269-11544268 Arabidopsis thaliana
AT4G21710 2.0kb downstream 2.0kb downstream 8744 true Chr4: 11533525-11542268 Arabidopsis thaliana
AT4G21710 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11533525-11535524 Arabidopsis thaliana
AT4G21710 5.0kb upstream 5.0kb upstream 11744 true Chr4: 11535525-11547268 Arabidopsis thaliana
AT4G21710 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11542269-11547268 Arabidopsis thaliana
AT4G21710 5.0kb downstream 5.0kb downstream 11744 true Chr4: 11530525-11542268 Arabidopsis thaliana
AT4G21710 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11530525-11535524 Arabidopsis thaliana
AT4G21710 10.0kb upstream 10.0kb upstream 16744 true Chr4: 11535525-11552268 Arabidopsis thaliana
AT4G21710 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11542269-11552268 Arabidopsis thaliana
AT4G21710 10.0kb downstream 10.0kb downstream 16744 true Chr4: 11525525-11542268 Arabidopsis thaliana
AT4G21710 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11525525-11535524 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372214 5261 Brassicaceae View MSA
123829611 5264 Brassicales-Malvales View MSA
124341344 5266 SBM View MSA
124252015 5268 Malvidae View MSA
124061336 5270 Rosid View MSA
123743621 5271 Pentapetalae View MSA
122789803 5272 Eudicot View MSA
122041564 5273 Angiosperm View MSA
121347423 5274 Embryophyte View MSA
123428402 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.375        
cufflinks 18.206        
cufflinks 12.194       Low
cufflinks 19.916       High
cufflinks 13.299        
cufflinks 17.375        

0 Strain