Gene : Glyma.06G064100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR19970 - RIBOSOMAL PROTEIN L39E Genomic Order:  641
Name:  ? Glyma.06G064100 Secondary Identifier:  ? PAC:30551074
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G064100 0.5kb upstream 0.5kb upstream 1435 true Chr06: 4884943-4886377 Glycine max
Glyma.06G064100 0.5kb upstream 0.5kb upstream 500 false Chr06: 4884943-4885442 Glycine max
Glyma.06G064100 0.5kb downstream 0.5kb downstream 1435 true Chr06: 4885443-4886877 Glycine max
Glyma.06G064100 0.5kb downstream 0.5kb downstream 500 false Chr06: 4886378-4886877 Glycine max
Glyma.06G064100 1.0kb upstream 1.0kb upstream 1935 true Chr06: 4884443-4886377 Glycine max
Glyma.06G064100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4884443-4885442 Glycine max
Glyma.06G064100 1.0kb downstream 1.0kb downstream 1935 true Chr06: 4885443-4887377 Glycine max
Glyma.06G064100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4886378-4887377 Glycine max
Glyma.06G064100 2.0kb upstream 2.0kb upstream 2935 true Chr06: 4883443-4886377 Glycine max
Glyma.06G064100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4883443-4885442 Glycine max
Glyma.06G064100 2.0kb downstream 2.0kb downstream 2935 true Chr06: 4885443-4888377 Glycine max
Glyma.06G064100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4886378-4888377 Glycine max
Glyma.06G064100 5.0kb upstream 5.0kb upstream 5935 true Chr06: 4880443-4886377 Glycine max
Glyma.06G064100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4880443-4885442 Glycine max
Glyma.06G064100 5.0kb downstream 5.0kb downstream 5935 true Chr06: 4885443-4891377 Glycine max
Glyma.06G064100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4886378-4891377 Glycine max
Glyma.06G064100 10.0kb upstream 10.0kb upstream 10935 true Chr06: 4875443-4886377 Glycine max
Glyma.06G064100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4875443-4885442 Glycine max
Glyma.06G064100 10.0kb downstream 10.0kb downstream 10935 true Chr06: 4885443-4896377 Glycine max
Glyma.06G064100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4886378-4896377 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313069 5265 Fabidae View MSA
124071579 5270 Rosid View MSA
123745960 5271 Pentapetalae View MSA
122796201 5272 Eudicot View MSA
122050274 5273 Angiosperm View MSA
121348597 5274 Embryophyte View MSA
123424363 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.2468 0.0 95.2264 High  
cufflinks 52.9186 0.0 141.218 High  
cufflinks 18.4071 0.0 52.3873   Low
cufflinks 21.1669 0.0 59.2966 High Low
cufflinks 106.19 0.0 289.928 High High
cufflinks 57.4333 0.0 153.229 High  
cufflinks 49.2164 0.0 131.422 High  
cufflinks 43.0274 0.0 115.224 High  
cufflinks 43.604 0.0 116.698 High  
cufflinks 18.026     High  
cufflinks 9.081     High Low
cufflinks 13.923     High  
cufflinks 60.251     High High
cufflinks 92.528     High High
cufflinks 9.694     High  
cufflinks 16.012     High  
cufflinks 14.652     High  
cufflinks 16.463     High  
cufflinks 21.765     High  
cufflinks 10.607     High  
cufflinks 14.366     High  
cufflinks 12.516     High  
cufflinks 15.457     High  
cufflinks 9.745     High  
cufflinks 14.907     High  
cufflinks 18.665     High  

0 Strain