Gene : Glyma.06G052100 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  521
Name:  ? Glyma.06G052100 Secondary Identifier:  ? PAC:30551145
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYCLEAV-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G052100 0.5kb upstream 0.5kb upstream 6546 true Chr06: 3920327-3926872 Glycine max
Glyma.06G052100 0.5kb upstream 0.5kb upstream 500 false Chr06: 3926373-3926872 Glycine max
Glyma.06G052100 0.5kb downstream 0.5kb downstream 6546 true Chr06: 3919827-3926372 Glycine max
Glyma.06G052100 0.5kb downstream 0.5kb downstream 500 false Chr06: 3919827-3920326 Glycine max
Glyma.06G052100 1.0kb upstream 1.0kb upstream 7046 true Chr06: 3920327-3927372 Glycine max
Glyma.06G052100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3926373-3927372 Glycine max
Glyma.06G052100 1.0kb downstream 1.0kb downstream 7046 true Chr06: 3919327-3926372 Glycine max
Glyma.06G052100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3919327-3920326 Glycine max
Glyma.06G052100 2.0kb upstream 2.0kb upstream 8046 true Chr06: 3920327-3928372 Glycine max
Glyma.06G052100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3926373-3928372 Glycine max
Glyma.06G052100 2.0kb downstream 2.0kb downstream 8046 true Chr06: 3918327-3926372 Glycine max
Glyma.06G052100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3918327-3920326 Glycine max
Glyma.06G052100 5.0kb upstream 5.0kb upstream 11046 true Chr06: 3920327-3931372 Glycine max
Glyma.06G052100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3926373-3931372 Glycine max
Glyma.06G052100 5.0kb downstream 5.0kb downstream 11046 true Chr06: 3915327-3926372 Glycine max
Glyma.06G052100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3915327-3920326 Glycine max
Glyma.06G052100 10.0kb upstream 10.0kb upstream 16046 true Chr06: 3920327-3936372 Glycine max
Glyma.06G052100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3926373-3936372 Glycine max
Glyma.06G052100 10.0kb downstream 10.0kb downstream 16046 true Chr06: 3910327-3926372 Glycine max
Glyma.06G052100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3910327-3920326 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254614 5265 Fabidae View MSA
123996694 5270 Rosid View MSA
123571120 5271 Pentapetalae View MSA
122605850 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.29182 0.0 6.68305   Low
cufflinks 7.54987 0.0 20.1686    
cufflinks 1.7398 0.0 5.27471   Low
cufflinks 10.6533 0.0 28.4771    
cufflinks 15.6359 0.0 42.5074    
cufflinks 16.5938 0.0 45.2705    
cufflinks 4.16793 0.0 11.4199    
cufflinks 21.1012 0.0 58.759 High High
cufflinks 8.37028 0.0 22.3325    
cufflinks 12.955     High High
cufflinks 1.212       Low
cufflinks 2.794        
cufflinks 12.304     High High
cufflinks 14.798     High High
cufflinks 1.639       Low
cufflinks 3.367        
cufflinks 3.299        
cufflinks 5.893        
cufflinks 10.17     High High
cufflinks 2.168        
cufflinks 2.507        
cufflinks 2.732        
cufflinks 2.994        
cufflinks 1.214       Low
cufflinks 2.548        
cufflinks 3.358        

0 Strain