Gene : Glyma.06G053000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31223:SF4 - CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG8-RELATED Genomic Order:  530
Name:  ? Glyma.06G053000 Secondary Identifier:  ? PAC:30553459
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G053000 0.5kb upstream 0.5kb upstream 3471 true Chr06: 4010192-4013662 Glycine max
Glyma.06G053000 0.5kb upstream 0.5kb upstream 500 false Chr06: 4010192-4010691 Glycine max
Glyma.06G053000 0.5kb downstream 0.5kb downstream 3471 true Chr06: 4010692-4014162 Glycine max
Glyma.06G053000 0.5kb downstream 0.5kb downstream 500 false Chr06: 4013663-4014162 Glycine max
Glyma.06G053000 1.0kb upstream 1.0kb upstream 3971 true Chr06: 4009692-4013662 Glycine max
Glyma.06G053000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4009692-4010691 Glycine max
Glyma.06G053000 1.0kb downstream 1.0kb downstream 3971 true Chr06: 4010692-4014662 Glycine max
Glyma.06G053000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4013663-4014662 Glycine max
Glyma.06G053000 2.0kb upstream 2.0kb upstream 4971 true Chr06: 4008692-4013662 Glycine max
Glyma.06G053000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4008692-4010691 Glycine max
Glyma.06G053000 2.0kb downstream 2.0kb downstream 4971 true Chr06: 4010692-4015662 Glycine max
Glyma.06G053000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4013663-4015662 Glycine max
Glyma.06G053000 5.0kb upstream 5.0kb upstream 7971 true Chr06: 4005692-4013662 Glycine max
Glyma.06G053000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4005692-4010691 Glycine max
Glyma.06G053000 5.0kb downstream 5.0kb downstream 7971 true Chr06: 4010692-4018662 Glycine max
Glyma.06G053000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4013663-4018662 Glycine max
Glyma.06G053000 10.0kb upstream 10.0kb upstream 12971 true Chr06: 4000692-4013662 Glycine max
Glyma.06G053000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4000692-4010691 Glycine max
Glyma.06G053000 10.0kb downstream 10.0kb downstream 12971 true Chr06: 4010692-4023662 Glycine max
Glyma.06G053000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4013663-4023662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313266 5265 Fabidae View MSA
124073567 5270 Rosid View MSA
123748109 5271 Pentapetalae View MSA
122794751 5272 Eudicot View MSA
122046742 5273 Angiosperm View MSA
121351757 5274 Embryophyte View MSA
123427506 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4679 0.0 44.4409   High
cufflinks 1.73382 0.0 6.04779    
cufflinks 20.6571 0.0 55.2283 High High
cufflinks 0.896001 0.0 3.27383   Low
cufflinks 4.06743 0.0 12.7872    
cufflinks 15.0403 0.0 40.7488   High
cufflinks 3.7881 0.0 12.0447    
cufflinks 4.45823 0.0 13.8189    
cufflinks 3.07388 0.0 10.0356    
cufflinks 2.957        
cufflinks 4.939        
cufflinks 2.922        
cufflinks 3.893        
cufflinks 2.054        
cufflinks 0.617        
cufflinks 0.832        
cufflinks 15.879     High High
cufflinks 0.119       Low
cufflinks 0.501       Low
cufflinks 0.603        
cufflinks 4.164        
cufflinks 1.125        
cufflinks 2.37        
cufflinks 7.276     High High
cufflinks 1.059        
cufflinks 6.641     High High

0 Strain