Gene : Glyma.06G053200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24031:SF294 - EUKARYOTIC INITIATION FACTOR 4A-1-RELATED Genomic Order:  532
Name:  ? Glyma.06G053200 Secondary Identifier:  ? PAC:30554146
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G053200 0.5kb upstream 0.5kb upstream 3900 true Chr06: 4026287-4030186 Glycine max
Glyma.06G053200 0.5kb upstream 0.5kb upstream 500 false Chr06: 4026287-4026786 Glycine max
Glyma.06G053200 0.5kb downstream 0.5kb downstream 3900 true Chr06: 4026787-4030686 Glycine max
Glyma.06G053200 0.5kb downstream 0.5kb downstream 500 false Chr06: 4030187-4030686 Glycine max
Glyma.06G053200 1.0kb upstream 1.0kb upstream 4400 true Chr06: 4025787-4030186 Glycine max
Glyma.06G053200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4025787-4026786 Glycine max
Glyma.06G053200 1.0kb downstream 1.0kb downstream 4400 true Chr06: 4026787-4031186 Glycine max
Glyma.06G053200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4030187-4031186 Glycine max
Glyma.06G053200 2.0kb upstream 2.0kb upstream 5400 true Chr06: 4024787-4030186 Glycine max
Glyma.06G053200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4024787-4026786 Glycine max
Glyma.06G053200 2.0kb downstream 2.0kb downstream 5400 true Chr06: 4026787-4032186 Glycine max
Glyma.06G053200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4030187-4032186 Glycine max
Glyma.06G053200 5.0kb upstream 5.0kb upstream 8400 true Chr06: 4021787-4030186 Glycine max
Glyma.06G053200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4021787-4026786 Glycine max
Glyma.06G053200 5.0kb downstream 5.0kb downstream 8400 true Chr06: 4026787-4035186 Glycine max
Glyma.06G053200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4030187-4035186 Glycine max
Glyma.06G053200 10.0kb upstream 10.0kb upstream 13400 true Chr06: 4016787-4030186 Glycine max
Glyma.06G053200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4016787-4026786 Glycine max
Glyma.06G053200 10.0kb downstream 10.0kb downstream 13400 true Chr06: 4026787-4040186 Glycine max
Glyma.06G053200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4030187-4040186 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315314 5265 Fabidae View MSA
124071119 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.589 0.0 49.6296   High
cufflinks 9.5203 0.0 25.7999    
cufflinks 14.0914 0.0 37.6348    
cufflinks 9.32332 0.0 25.2775    
cufflinks 13.6831 0.0 36.5671    
cufflinks 20.3919 0.0 54.5441   High
cufflinks 10.9018 0.0 29.3265    
cufflinks 8.47761 0.0 23.1102   Low
cufflinks 10.7768 0.0 29.0104    
cufflinks 4.901        
cufflinks 18.972     High High
cufflinks 7.023        
cufflinks 8.168     High  
cufflinks 7.81     High  
cufflinks 7.682     High  
cufflinks 4.631        
cufflinks 23.856     High High
cufflinks 4.077        
cufflinks 7.395        
cufflinks 3.606       Low
cufflinks 27.598     High High
cufflinks 4.424        
cufflinks 5.28        
cufflinks 30.633     High High
cufflinks 3.705       Low
cufflinks 27.69     High High

0 Strain