Gene : Glyma.06G045900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23315:SF64 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  459
Name:  ? Glyma.06G045900 Secondary Identifier:  ? PAC:30550743
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G045900 0.5kb upstream 0.5kb upstream 2204 true Chr06: 3480019-3482222 Glycine max
Glyma.06G045900 0.5kb upstream 0.5kb upstream 500 false Chr06: 3480019-3480518 Glycine max
Glyma.06G045900 0.5kb downstream 0.5kb downstream 2204 true Chr06: 3480519-3482722 Glycine max
Glyma.06G045900 0.5kb downstream 0.5kb downstream 500 false Chr06: 3482223-3482722 Glycine max
Glyma.06G045900 1.0kb upstream 1.0kb upstream 2704 true Chr06: 3479519-3482222 Glycine max
Glyma.06G045900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3479519-3480518 Glycine max
Glyma.06G045900 1.0kb downstream 1.0kb downstream 2704 true Chr06: 3480519-3483222 Glycine max
Glyma.06G045900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3482223-3483222 Glycine max
Glyma.06G045900 2.0kb upstream 2.0kb upstream 3704 true Chr06: 3478519-3482222 Glycine max
Glyma.06G045900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3478519-3480518 Glycine max
Glyma.06G045900 2.0kb downstream 2.0kb downstream 3704 true Chr06: 3480519-3484222 Glycine max
Glyma.06G045900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3482223-3484222 Glycine max
Glyma.06G045900 5.0kb upstream 5.0kb upstream 6704 true Chr06: 3475519-3482222 Glycine max
Glyma.06G045900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3475519-3480518 Glycine max
Glyma.06G045900 5.0kb downstream 5.0kb downstream 6704 true Chr06: 3480519-3487222 Glycine max
Glyma.06G045900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3482223-3487222 Glycine max
Glyma.06G045900 10.0kb upstream 10.0kb upstream 11704 true Chr06: 3470519-3482222 Glycine max
Glyma.06G045900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3470519-3480518 Glycine max
Glyma.06G045900 10.0kb downstream 10.0kb downstream 11704 true Chr06: 3480519-3492222 Glycine max
Glyma.06G045900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3482223-3492222 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617736 5273 Angiosperm View MSA
122254015 5265 Fabidae View MSA
123996362 5270 Rosid View MSA
123570848 5271 Pentapetalae View MSA
122605581 5272 Eudicot View MSA
120889875 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.3868 0.0 4.73385    
cufflinks 0.832204 0.0 2.9822    
cufflinks 0.283835 0.0 1.07775    
cufflinks 0.17942 0.0 0.693477   Low
cufflinks 1.15973 0.0 4.01267    
cufflinks 3.99749 0.0 11.8315   High
cufflinks 0.485257 0.0 1.78642    
cufflinks 0.108741 0.0 0.429094 Low Low
cufflinks 0.694758 0.0 2.51345    
cufflinks 0.95        
cufflinks 6.269     High High
cufflinks 0.641       Low
cufflinks 2.018        
cufflinks 1.042        
cufflinks 2.229        
cufflinks 1.834        
cufflinks 11.466     High High
cufflinks 0.959        
cufflinks 0.982        
cufflinks 0.847        
cufflinks 2.842        
cufflinks 0.875        
cufflinks 1.824        
cufflinks 3.157        
cufflinks 0.96        
cufflinks 4.587       High

0 Strain