Gene : Glyma.06G046200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10177:SF255 - CYCLIN-D5-1 Genomic Order:  462
Name:  ? Glyma.06G046200 Secondary Identifier:  ? PAC:30552036
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G046200 0.5kb upstream 0.5kb upstream 2952 true Chr06: 3496108-3499059 Glycine max
Glyma.06G046200 0.5kb upstream 0.5kb upstream 500 false Chr06: 3498560-3499059 Glycine max
Glyma.06G046200 0.5kb downstream 0.5kb downstream 2952 true Chr06: 3495608-3498559 Glycine max
Glyma.06G046200 0.5kb downstream 0.5kb downstream 500 false Chr06: 3495608-3496107 Glycine max
Glyma.06G046200 1.0kb upstream 1.0kb upstream 3452 true Chr06: 3496108-3499559 Glycine max
Glyma.06G046200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3498560-3499559 Glycine max
Glyma.06G046200 1.0kb downstream 1.0kb downstream 3452 true Chr06: 3495108-3498559 Glycine max
Glyma.06G046200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3495108-3496107 Glycine max
Glyma.06G046200 2.0kb upstream 2.0kb upstream 4452 true Chr06: 3496108-3500559 Glycine max
Glyma.06G046200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3498560-3500559 Glycine max
Glyma.06G046200 2.0kb downstream 2.0kb downstream 4452 true Chr06: 3494108-3498559 Glycine max
Glyma.06G046200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3494108-3496107 Glycine max
Glyma.06G046200 5.0kb upstream 5.0kb upstream 7452 true Chr06: 3496108-3503559 Glycine max
Glyma.06G046200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3498560-3503559 Glycine max
Glyma.06G046200 5.0kb downstream 5.0kb downstream 7452 true Chr06: 3491108-3498559 Glycine max
Glyma.06G046200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3491108-3496107 Glycine max
Glyma.06G046200 10.0kb upstream 10.0kb upstream 12452 true Chr06: 3496108-3508559 Glycine max
Glyma.06G046200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3498560-3508559 Glycine max
Glyma.06G046200 10.0kb downstream 10.0kb downstream 12452 true Chr06: 3486108-3498559 Glycine max
Glyma.06G046200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3486108-3496107 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313821 5265 Fabidae View MSA
124070747 5270 Rosid View MSA
123751298 5271 Pentapetalae View MSA
122797790 5272 Eudicot View MSA
122049742 5273 Angiosperm View MSA
121311569 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.973993 0.0 5.47399    
cufflinks 2.94832 0.0 9.12953   High
cufflinks 0.619676 0.0 4.05407   Low
cufflinks 1.62823 0.0 8.27245    
cufflinks 1.58647 0.0 8.06539    
cufflinks 1.8001 0.0 8.63966    
cufflinks 1.76877 0.0 6.36874    
cufflinks 0.905816 0.0 5.27097    
cufflinks 1.34386 0.0 7.02691    
cufflinks 0.659        
cufflinks 0.063       Low
cufflinks 0.464        
cufflinks 0.39        
cufflinks 0.149        
cufflinks 0.121        
cufflinks 0.451        
cufflinks 0.369        
cufflinks 0.664        
cufflinks 1.029       High
cufflinks 0.27        
cufflinks 0.041     Low Low
cufflinks 0.429        
cufflinks 0.912       High
cufflinks 0.035     Low Low
cufflinks 0.287        
cufflinks 0.078       Low

0 Strain