Gene : Glyma.06G050300 G. max Wm82.a2.v1
Defline:  (1 of 95) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  503
Name:  ? Glyma.06G050300 Secondary Identifier:  ? PAC:30549861
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G050300 0.5kb upstream 0.5kb upstream 2098 true Chr06: 3822510-3824607 Glycine max
Glyma.06G050300 0.5kb upstream 0.5kb upstream 500 false Chr06: 3822510-3823009 Glycine max
Glyma.06G050300 0.5kb downstream 0.5kb downstream 2098 true Chr06: 3823010-3825107 Glycine max
Glyma.06G050300 0.5kb downstream 0.5kb downstream 500 false Chr06: 3824608-3825107 Glycine max
Glyma.06G050300 1.0kb upstream 1.0kb upstream 2598 true Chr06: 3822010-3824607 Glycine max
Glyma.06G050300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3822010-3823009 Glycine max
Glyma.06G050300 1.0kb downstream 1.0kb downstream 2598 true Chr06: 3823010-3825607 Glycine max
Glyma.06G050300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3824608-3825607 Glycine max
Glyma.06G050300 2.0kb upstream 2.0kb upstream 3598 true Chr06: 3821010-3824607 Glycine max
Glyma.06G050300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3821010-3823009 Glycine max
Glyma.06G050300 2.0kb downstream 2.0kb downstream 3598 true Chr06: 3823010-3826607 Glycine max
Glyma.06G050300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3824608-3826607 Glycine max
Glyma.06G050300 5.0kb upstream 5.0kb upstream 6598 true Chr06: 3818010-3824607 Glycine max
Glyma.06G050300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3818010-3823009 Glycine max
Glyma.06G050300 5.0kb downstream 5.0kb downstream 6598 true Chr06: 3823010-3829607 Glycine max
Glyma.06G050300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3824608-3829607 Glycine max
Glyma.06G050300 10.0kb upstream 10.0kb upstream 11598 true Chr06: 3813010-3824607 Glycine max
Glyma.06G050300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3813010-3823009 Glycine max
Glyma.06G050300 10.0kb downstream 10.0kb downstream 11598 true Chr06: 3823010-3834607 Glycine max
Glyma.06G050300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3824608-3834607 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298323 5265 Fabidae View MSA
124066464 5270 Rosid View MSA
123752127 5271 Pentapetalae View MSA
122796629 5272 Eudicot View MSA
122048745 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.17526 0.0 23.1099    
cufflinks 6.37218 0.0 18.5892    
cufflinks 40.2793 0.0 108.786 High High
cufflinks 27.5825 0.0 73.6486 High High
cufflinks 7.74067 0.0 21.9375    
cufflinks 2.2142 0.0 7.43761   Low
cufflinks 11.8318 0.0 32.3544    
cufflinks 4.75366 0.0 14.4248    
cufflinks 10.7577 0.0 29.5988    
cufflinks 4.026        
cufflinks 75.049     High High
cufflinks 16.884     High  
cufflinks 0.532       Low
cufflinks 1.789       Low
cufflinks 67.668     High High
cufflinks 20.039     High  
cufflinks 3.621        
cufflinks 7.49     High  
cufflinks 7.486     High  
cufflinks 40.865     High  
cufflinks 55.051     High  
cufflinks 21.354     High  
cufflinks 4.294        
cufflinks 39.941     High  
cufflinks 36.854     High  
cufflinks 36.942     High  

0 Strain