Gene : Glyma.06G079800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22952//PTHR22952:SF113 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  798
Name:  ? Glyma.06G079800 Secondary Identifier:  ? PAC:30553618
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G079800 0.5kb upstream 0.5kb upstream 5624 true Chr06: 6126608-6132231 Glycine max
Glyma.06G079800 0.5kb upstream 0.5kb upstream 500 false Chr06: 6126608-6127107 Glycine max
Glyma.06G079800 0.5kb downstream 0.5kb downstream 5624 true Chr06: 6127108-6132731 Glycine max
Glyma.06G079800 0.5kb downstream 0.5kb downstream 500 false Chr06: 6132232-6132731 Glycine max
Glyma.06G079800 1.0kb upstream 1.0kb upstream 6124 true Chr06: 6126108-6132231 Glycine max
Glyma.06G079800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6126108-6127107 Glycine max
Glyma.06G079800 1.0kb downstream 1.0kb downstream 6124 true Chr06: 6127108-6133231 Glycine max
Glyma.06G079800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6132232-6133231 Glycine max
Glyma.06G079800 2.0kb upstream 2.0kb upstream 7124 true Chr06: 6125108-6132231 Glycine max
Glyma.06G079800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6125108-6127107 Glycine max
Glyma.06G079800 2.0kb downstream 2.0kb downstream 7124 true Chr06: 6127108-6134231 Glycine max
Glyma.06G079800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6132232-6134231 Glycine max
Glyma.06G079800 5.0kb upstream 5.0kb upstream 10124 true Chr06: 6122108-6132231 Glycine max
Glyma.06G079800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6122108-6127107 Glycine max
Glyma.06G079800 5.0kb downstream 5.0kb downstream 10124 true Chr06: 6127108-6137231 Glycine max
Glyma.06G079800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6132232-6137231 Glycine max
Glyma.06G079800 10.0kb upstream 10.0kb upstream 15124 true Chr06: 6117108-6132231 Glycine max
Glyma.06G079800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6117108-6127107 Glycine max
Glyma.06G079800 10.0kb downstream 10.0kb downstream 15124 true Chr06: 6127108-6142231 Glycine max
Glyma.06G079800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6132232-6142231 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029163 5273 Angiosperm View MSA
122312182 5265 Fabidae View MSA
124062967 5270 Rosid View MSA
123747732 5271 Pentapetalae View MSA
122794989 5272 Eudicot View MSA
123428913 5275 Viridiplantae View MSA
121298544 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3241 0.0 37.8562   Low
cufflinks 14.3692 0.0 49.6781    
cufflinks 15.8491 0.0 54.1475    
cufflinks 15.409 0.0 52.7423    
cufflinks 45.6967 0.0 157.598 High High
cufflinks 24.4658 0.0 81.2886 High  
cufflinks 25.8678 0.0 85.8704 High  
cufflinks 27.4476 0.0 91.2902 High  
cufflinks 79.7518 0.0 308.257 High High
cufflinks 1.827        
cufflinks 13.654     High High
cufflinks 2.518        
cufflinks 4.003        
cufflinks 3.665        
cufflinks 22.93     High High
cufflinks 1.052       Low
cufflinks 3.883        
cufflinks 2.072        
cufflinks 1.856        
cufflinks 1.043       Low
cufflinks 17.413     High High
cufflinks 1.029       Low
cufflinks 0.921       Low
cufflinks 16.196     High High
cufflinks 1.008       Low
cufflinks 10.767     High High

0 Strain