Gene : Glyma.06G080300 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.1.1.33 - tRNA (guanine(46)-N(7))-methyltransferase / tRNA guanine 7-methyltransferase Genomic Order:  803
Name:  ? Glyma.06G080300 Secondary Identifier:  ? PAC:30553758
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G080300 0.5kb upstream 0.5kb upstream 3135 true Chr06: 6169565-6172699 Glycine max
Glyma.06G080300 0.5kb upstream 0.5kb upstream 500 false Chr06: 6169565-6170064 Glycine max
Glyma.06G080300 0.5kb downstream 0.5kb downstream 3135 true Chr06: 6170065-6173199 Glycine max
Glyma.06G080300 0.5kb downstream 0.5kb downstream 500 false Chr06: 6172700-6173199 Glycine max
Glyma.06G080300 1.0kb upstream 1.0kb upstream 3635 true Chr06: 6169065-6172699 Glycine max
Glyma.06G080300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6169065-6170064 Glycine max
Glyma.06G080300 1.0kb downstream 1.0kb downstream 3635 true Chr06: 6170065-6173699 Glycine max
Glyma.06G080300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6172700-6173699 Glycine max
Glyma.06G080300 2.0kb upstream 2.0kb upstream 4635 true Chr06: 6168065-6172699 Glycine max
Glyma.06G080300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6168065-6170064 Glycine max
Glyma.06G080300 2.0kb downstream 2.0kb downstream 4635 true Chr06: 6170065-6174699 Glycine max
Glyma.06G080300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6172700-6174699 Glycine max
Glyma.06G080300 5.0kb upstream 5.0kb upstream 7635 true Chr06: 6165065-6172699 Glycine max
Glyma.06G080300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6165065-6170064 Glycine max
Glyma.06G080300 5.0kb downstream 5.0kb downstream 7635 true Chr06: 6170065-6177699 Glycine max
Glyma.06G080300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6172700-6177699 Glycine max
Glyma.06G080300 10.0kb upstream 10.0kb upstream 12635 true Chr06: 6160065-6172699 Glycine max
Glyma.06G080300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6160065-6170064 Glycine max
Glyma.06G080300 10.0kb downstream 10.0kb downstream 12635 true Chr06: 6170065-6182699 Glycine max
Glyma.06G080300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6172700-6182699 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243495 5265 Fabidae Singleton cluster - no MSA
123988005 5270 Rosid Singleton cluster - no MSA
123742667 5271 Pentapetalae View MSA
122790265 5272 Eudicot View MSA
122041903 5273 Angiosperm View MSA
121344094 5274 Embryophyte View MSA
123425098 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.81667 0.0 26.4853    
cufflinks 5.37854 0.0 20.8763    
cufflinks 4.48274 0.0 18.3334   Low
cufflinks 4.95201 0.0 19.9705    
cufflinks 7.41114 0.0 28.5613    
cufflinks 8.0422 0.0 27.9804   High
cufflinks 3.7914 0.0 17.0295   Low
cufflinks 7.72075 0.0 26.9565    
cufflinks 6.48318 0.0 24.1839    
cufflinks 1.003        
cufflinks 0.896        
cufflinks 1.159        
cufflinks 2.219       High
cufflinks 2.976       High
cufflinks 0.78        
cufflinks 0.639       Low
cufflinks 1.0        
cufflinks 1.172        
cufflinks 1.559        
cufflinks 0.524       Low
cufflinks 0.899        
cufflinks 0.714        
cufflinks 1.153        
cufflinks 1.183        
cufflinks 0.686        
cufflinks 0.976        

0 Strain