Gene : Glyma.06G081300 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  813
Name:  ? Glyma.06G081300 Secondary Identifier:  ? PAC:30551027
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWYDQC-4 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G081300 0.5kb upstream 0.5kb upstream 5081 true Chr06: 6243511-6248591 Glycine max
Glyma.06G081300 0.5kb upstream 0.5kb upstream 500 false Chr06: 6243511-6244010 Glycine max
Glyma.06G081300 0.5kb downstream 0.5kb downstream 5081 true Chr06: 6244011-6249091 Glycine max
Glyma.06G081300 0.5kb downstream 0.5kb downstream 500 false Chr06: 6248592-6249091 Glycine max
Glyma.06G081300 1.0kb upstream 1.0kb upstream 5581 true Chr06: 6243011-6248591 Glycine max
Glyma.06G081300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6243011-6244010 Glycine max
Glyma.06G081300 1.0kb downstream 1.0kb downstream 5581 true Chr06: 6244011-6249591 Glycine max
Glyma.06G081300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6248592-6249591 Glycine max
Glyma.06G081300 2.0kb upstream 2.0kb upstream 6581 true Chr06: 6242011-6248591 Glycine max
Glyma.06G081300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6242011-6244010 Glycine max
Glyma.06G081300 2.0kb downstream 2.0kb downstream 6581 true Chr06: 6244011-6250591 Glycine max
Glyma.06G081300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6248592-6250591 Glycine max
Glyma.06G081300 5.0kb upstream 5.0kb upstream 9581 true Chr06: 6239011-6248591 Glycine max
Glyma.06G081300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6239011-6244010 Glycine max
Glyma.06G081300 5.0kb downstream 5.0kb downstream 9581 true Chr06: 6244011-6253591 Glycine max
Glyma.06G081300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6248592-6253591 Glycine max
Glyma.06G081300 10.0kb upstream 10.0kb upstream 14581 true Chr06: 6234011-6248591 Glycine max
Glyma.06G081300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6234011-6244010 Glycine max
Glyma.06G081300 10.0kb downstream 10.0kb downstream 14581 true Chr06: 6244011-6258591 Glycine max
Glyma.06G081300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6248592-6258591 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311336 5265 Fabidae View MSA
124069370 5270 Rosid View MSA
123747095 5271 Pentapetalae View MSA
122790040 5272 Eudicot View MSA
122050610 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.08515 0.0 3.62845    
cufflinks 0.803414 0.0 2.78057    
cufflinks 2.03368 0.0 6.21997   High
cufflinks 0.081757 0.0 0.320309 Low  
cufflinks 0.660719 0.0 2.32329    
cufflinks 0.0140478 0.0 0.060202 Low Low
cufflinks 0.052903 0.0 0.210575 Low  
cufflinks 0.0902795 0.0 0.352502 Low  
cufflinks 1.39689 0.0 4.51441    
cufflinks 0.137        
cufflinks 0.224        
cufflinks 1.179        
cufflinks 0.091     Low Low
cufflinks 0.041     Low Low
cufflinks 5.937     High High
cufflinks 0.519        
cufflinks 0.092       Low
cufflinks 1.856       High
cufflinks 0.714        
cufflinks 0.575        
cufflinks 0.248        
cufflinks 0.716        
cufflinks 0.892        
cufflinks 0.399        
cufflinks 0.743        
cufflinks 0.11       Low

0 Strain