Gene : Glyma.06G081600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11134:SF4 - AP-4 COMPLEX SUBUNIT BETA-1 Genomic Order:  816
Name:  ? Glyma.06G081600 Secondary Identifier:  ? PAC:30551287
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G081600 0.5kb upstream 0.5kb upstream 10676 true Chr06: 6273144-6283819 Glycine max
Glyma.06G081600 0.5kb upstream 0.5kb upstream 500 false Chr06: 6273144-6273643 Glycine max
Glyma.06G081600 0.5kb downstream 0.5kb downstream 10676 true Chr06: 6273644-6284319 Glycine max
Glyma.06G081600 0.5kb downstream 0.5kb downstream 500 false Chr06: 6283820-6284319 Glycine max
Glyma.06G081600 1.0kb upstream 1.0kb upstream 11176 true Chr06: 6272644-6283819 Glycine max
Glyma.06G081600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6272644-6273643 Glycine max
Glyma.06G081600 1.0kb downstream 1.0kb downstream 11176 true Chr06: 6273644-6284819 Glycine max
Glyma.06G081600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6283820-6284819 Glycine max
Glyma.06G081600 2.0kb upstream 2.0kb upstream 12176 true Chr06: 6271644-6283819 Glycine max
Glyma.06G081600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6271644-6273643 Glycine max
Glyma.06G081600 2.0kb downstream 2.0kb downstream 12176 true Chr06: 6273644-6285819 Glycine max
Glyma.06G081600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6283820-6285819 Glycine max
Glyma.06G081600 5.0kb upstream 5.0kb upstream 15176 true Chr06: 6268644-6283819 Glycine max
Glyma.06G081600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6268644-6273643 Glycine max
Glyma.06G081600 5.0kb downstream 5.0kb downstream 15176 true Chr06: 6273644-6288819 Glycine max
Glyma.06G081600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6283820-6288819 Glycine max
Glyma.06G081600 10.0kb upstream 10.0kb upstream 20176 true Chr06: 6263644-6283819 Glycine max
Glyma.06G081600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6263644-6273643 Glycine max
Glyma.06G081600 10.0kb downstream 10.0kb downstream 20176 true Chr06: 6273644-6293819 Glycine max
Glyma.06G081600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6283820-6293819 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040917 5273 Angiosperm View MSA
122300849 5265 Fabidae View MSA
124062984 5270 Rosid View MSA
123740433 5271 Pentapetalae View MSA
122790083 5272 Eudicot View MSA
121346542 5274 Embryophyte View MSA
123428647 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3314 0.0 41.4316   Low
cufflinks 14.1336 0.0 57.666    
cufflinks 12.1861 0.0 49.7094    
cufflinks 18.826 0.0 79.9354    
cufflinks 16.7109 0.0 69.5042    
cufflinks 14.8394 0.0 55.1942    
cufflinks 28.796 0.0 133.333 High High
cufflinks 16.0324 0.0 60.6667    
cufflinks 12.4591 0.0 50.1585    
cufflinks 2.317       High
cufflinks 0.552       Low
cufflinks 1.578        
cufflinks 2.084       High
cufflinks 2.316       High
cufflinks 0.616       Low
cufflinks 1.16        
cufflinks 0.924        
cufflinks 2.047       High
cufflinks 2.167       High
cufflinks 1.029        
cufflinks 0.755        
cufflinks 1.115        
cufflinks 1.527        
cufflinks 0.757        
cufflinks 1.053        
cufflinks 0.885        

0 Strain