Gene : Glyma.06G110800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31636:SF25 - SCARECROW-LIKE PROTEIN 26 Genomic Order:  1108
Name:  ? Glyma.06G110800 Secondary Identifier:  ? PAC:30550108
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G110800 0.5kb upstream 0.5kb upstream 1988 true Chr06: 8955809-8957796 Glycine max
Glyma.06G110800 0.5kb upstream 0.5kb upstream 500 false Chr06: 8957297-8957796 Glycine max
Glyma.06G110800 0.5kb downstream 0.5kb downstream 1988 true Chr06: 8955309-8957296 Glycine max
Glyma.06G110800 0.5kb downstream 0.5kb downstream 500 false Chr06: 8955309-8955808 Glycine max
Glyma.06G110800 1.0kb upstream 1.0kb upstream 2488 true Chr06: 8955809-8958296 Glycine max
Glyma.06G110800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8957297-8958296 Glycine max
Glyma.06G110800 1.0kb downstream 1.0kb downstream 2488 true Chr06: 8954809-8957296 Glycine max
Glyma.06G110800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8954809-8955808 Glycine max
Glyma.06G110800 2.0kb upstream 2.0kb upstream 3488 true Chr06: 8955809-8959296 Glycine max
Glyma.06G110800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8957297-8959296 Glycine max
Glyma.06G110800 2.0kb downstream 2.0kb downstream 3488 true Chr06: 8953809-8957296 Glycine max
Glyma.06G110800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8953809-8955808 Glycine max
Glyma.06G110800 5.0kb upstream 5.0kb upstream 6488 true Chr06: 8955809-8962296 Glycine max
Glyma.06G110800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8957297-8962296 Glycine max
Glyma.06G110800 5.0kb downstream 5.0kb downstream 6488 true Chr06: 8950809-8957296 Glycine max
Glyma.06G110800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8950809-8955808 Glycine max
Glyma.06G110800 10.0kb upstream 10.0kb upstream 11488 true Chr06: 8955809-8967296 Glycine max
Glyma.06G110800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8957297-8967296 Glycine max
Glyma.06G110800 10.0kb downstream 10.0kb downstream 11488 true Chr06: 8945809-8957296 Glycine max
Glyma.06G110800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8945809-8955808 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305315 5265 Fabidae View MSA
124066104 5270 Rosid View MSA
123741330 5271 Pentapetalae View MSA
122785836 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0314226 0.0 0.134216 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.464762 0.0 1.73322    
cufflinks 0.96547 0.0 3.46975    
cufflinks 0.0861114 0.0 0.344458 Low  
cufflinks 0.0932986 0.0 0.373621 Low  
cufflinks 1.4635 0.0 5.09681   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.783       High
cufflinks 0.158        
cufflinks 1.943       High
cufflinks 0.05     Low  
cufflinks 0.15        
cufflinks 0.007     Low Low
cufflinks 0.011     Low Low
cufflinks 0.093     Low  
cufflinks 0.391        
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.075        
cufflinks 0.067     Low  
cufflinks 0.473        

0 Strain