Gene : Glyma.06G112500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23354:SF75 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1 Genomic Order:  1125
Name:  ? Glyma.06G112500 Secondary Identifier:  ? PAC:30553231
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G112500 0.5kb upstream 0.5kb upstream 3377 true Chr06: 9126878-9130254 Glycine max
Glyma.06G112500 0.5kb upstream 0.5kb upstream 500 false Chr06: 9129755-9130254 Glycine max
Glyma.06G112500 0.5kb downstream 0.5kb downstream 3377 true Chr06: 9126378-9129754 Glycine max
Glyma.06G112500 0.5kb downstream 0.5kb downstream 500 false Chr06: 9126378-9126877 Glycine max
Glyma.06G112500 1.0kb upstream 1.0kb upstream 3877 true Chr06: 9126878-9130754 Glycine max
Glyma.06G112500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9129755-9130754 Glycine max
Glyma.06G112500 1.0kb downstream 1.0kb downstream 3877 true Chr06: 9125878-9129754 Glycine max
Glyma.06G112500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9125878-9126877 Glycine max
Glyma.06G112500 2.0kb upstream 2.0kb upstream 4877 true Chr06: 9126878-9131754 Glycine max
Glyma.06G112500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9129755-9131754 Glycine max
Glyma.06G112500 2.0kb downstream 2.0kb downstream 4877 true Chr06: 9124878-9129754 Glycine max
Glyma.06G112500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9124878-9126877 Glycine max
Glyma.06G112500 5.0kb upstream 5.0kb upstream 7877 true Chr06: 9126878-9134754 Glycine max
Glyma.06G112500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9129755-9134754 Glycine max
Glyma.06G112500 5.0kb downstream 5.0kb downstream 7877 true Chr06: 9121878-9129754 Glycine max
Glyma.06G112500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9121878-9126877 Glycine max
Glyma.06G112500 10.0kb upstream 10.0kb upstream 12877 true Chr06: 9126878-9139754 Glycine max
Glyma.06G112500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9129755-9139754 Glycine max
Glyma.06G112500 10.0kb downstream 10.0kb downstream 12877 true Chr06: 9116878-9129754 Glycine max
Glyma.06G112500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9116878-9126877 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300621 5265 Fabidae View MSA
124060398 5270 Rosid View MSA
123740598 5271 Pentapetalae View MSA
122791111 5272 Eudicot View MSA
122046889 5273 Angiosperm View MSA
121350976 5274 Embryophyte View MSA
123381953 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.71823 0.0 10.4883   Low
cufflinks 19.1491 0.0 73.6783    
cufflinks 2.03886 0.0 7.68115   Low
cufflinks 11.2414 0.0 43.8114    
cufflinks 14.7287 0.0 55.8811    
cufflinks 3.81644 0.0 11.8151    
cufflinks 21.717 0.0 79.6558   High
cufflinks 13.3135 0.0 53.7543    
cufflinks 11.8906 0.0 46.992    
cufflinks 5.975       High
cufflinks 0.206       Low
cufflinks 1.325        
cufflinks 3.617        
cufflinks 5.104       High
cufflinks 0.368       Low
cufflinks 2.109        
cufflinks 1.148        
cufflinks 2.209        
cufflinks 5.591       High
cufflinks 1.382        
cufflinks 0.505        
cufflinks 1.533        
cufflinks 3.073        
cufflinks 0.161       Low
cufflinks 1.537        
cufflinks 0.836        

0 Strain