Gene : Glyma.06G113400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13439:SF4 - PROTEIN K12H6.6, ISOFORM B-RELATED Genomic Order:  1134
Name:  ? Glyma.06G113400 Secondary Identifier:  ? PAC:30554172
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G113400 0.5kb upstream 0.5kb upstream 3395 true Chr06: 9211812-9215206 Glycine max
Glyma.06G113400 0.5kb upstream 0.5kb upstream 500 false Chr06: 9214707-9215206 Glycine max
Glyma.06G113400 0.5kb downstream 0.5kb downstream 3395 true Chr06: 9211312-9214706 Glycine max
Glyma.06G113400 0.5kb downstream 0.5kb downstream 500 false Chr06: 9211312-9211811 Glycine max
Glyma.06G113400 1.0kb upstream 1.0kb upstream 3895 true Chr06: 9211812-9215706 Glycine max
Glyma.06G113400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9214707-9215706 Glycine max
Glyma.06G113400 1.0kb downstream 1.0kb downstream 3895 true Chr06: 9210812-9214706 Glycine max
Glyma.06G113400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9210812-9211811 Glycine max
Glyma.06G113400 2.0kb upstream 2.0kb upstream 4895 true Chr06: 9211812-9216706 Glycine max
Glyma.06G113400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9214707-9216706 Glycine max
Glyma.06G113400 2.0kb downstream 2.0kb downstream 4895 true Chr06: 9209812-9214706 Glycine max
Glyma.06G113400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9209812-9211811 Glycine max
Glyma.06G113400 5.0kb upstream 5.0kb upstream 7895 true Chr06: 9211812-9219706 Glycine max
Glyma.06G113400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9214707-9219706 Glycine max
Glyma.06G113400 5.0kb downstream 5.0kb downstream 7895 true Chr06: 9206812-9214706 Glycine max
Glyma.06G113400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9206812-9211811 Glycine max
Glyma.06G113400 10.0kb upstream 10.0kb upstream 12895 true Chr06: 9211812-9224706 Glycine max
Glyma.06G113400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9214707-9224706 Glycine max
Glyma.06G113400 10.0kb downstream 10.0kb downstream 12895 true Chr06: 9201812-9214706 Glycine max
Glyma.06G113400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9201812-9211811 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307378 5265 Fabidae View MSA
124060547 5270 Rosid View MSA
123746967 5271 Pentapetalae View MSA
122786195 5272 Eudicot View MSA
122046296 5273 Angiosperm View MSA
121344008 5274 Embryophyte View MSA
123379957 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.37731 0.0 12.1405   High
cufflinks 1.89049 0.0 8.12082    
cufflinks 2.07759 0.0 11.0801    
cufflinks 1.82647 0.0 8.79846    
cufflinks 0.980734 0.0 5.32303   Low
cufflinks 2.11914 0.0 8.62054    
cufflinks 1.65593 0.0 8.83804    
cufflinks 0.944109 0.0 5.08473   Low
cufflinks 0.79637 0.0 4.13267   Low
cufflinks 1.665        
cufflinks 0.558       Low
cufflinks 2.024        
cufflinks 1.333        
cufflinks 0.478       Low
cufflinks 0.283       Low
cufflinks 2.361        
cufflinks 1.33        
cufflinks 1.201        
cufflinks 2.109        
cufflinks 1.58        
cufflinks 0.78        
cufflinks 2.122        
cufflinks 2.695       High
cufflinks 0.627        
cufflinks 2.734       High
cufflinks 0.754        

0 Strain