Gene : Glyma.06G114100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 Genomic Order:  1141
Name:  ? Glyma.06G114100 Secondary Identifier:  ? PAC:30549816
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G114100 0.5kb upstream 0.5kb upstream 8296 true Chr06: 9246695-9254990 Glycine max
Glyma.06G114100 0.5kb upstream 0.5kb upstream 500 false Chr06: 9254491-9254990 Glycine max
Glyma.06G114100 0.5kb downstream 0.5kb downstream 8296 true Chr06: 9246195-9254490 Glycine max
Glyma.06G114100 0.5kb downstream 0.5kb downstream 500 false Chr06: 9246195-9246694 Glycine max
Glyma.06G114100 1.0kb upstream 1.0kb upstream 8796 true Chr06: 9246695-9255490 Glycine max
Glyma.06G114100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9254491-9255490 Glycine max
Glyma.06G114100 1.0kb downstream 1.0kb downstream 8796 true Chr06: 9245695-9254490 Glycine max
Glyma.06G114100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9245695-9246694 Glycine max
Glyma.06G114100 2.0kb upstream 2.0kb upstream 9796 true Chr06: 9246695-9256490 Glycine max
Glyma.06G114100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9254491-9256490 Glycine max
Glyma.06G114100 2.0kb downstream 2.0kb downstream 9796 true Chr06: 9244695-9254490 Glycine max
Glyma.06G114100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9244695-9246694 Glycine max
Glyma.06G114100 5.0kb upstream 5.0kb upstream 12796 true Chr06: 9246695-9259490 Glycine max
Glyma.06G114100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9254491-9259490 Glycine max
Glyma.06G114100 5.0kb downstream 5.0kb downstream 12796 true Chr06: 9241695-9254490 Glycine max
Glyma.06G114100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9241695-9246694 Glycine max
Glyma.06G114100 10.0kb upstream 10.0kb upstream 17796 true Chr06: 9246695-9264490 Glycine max
Glyma.06G114100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9254491-9264490 Glycine max
Glyma.06G114100 10.0kb downstream 10.0kb downstream 17796 true Chr06: 9236695-9254490 Glycine max
Glyma.06G114100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9236695-9246694 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303095 5265 Fabidae View MSA
124063888 5270 Rosid View MSA
123738354 5271 Pentapetalae View MSA
122793599 5272 Eudicot View MSA
122045152 5273 Angiosperm View MSA
121344274 5274 Embryophyte View MSA
123424030 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.63033 0.0 13.9809    
cufflinks 7.84548 0.0 22.1481   High
cufflinks 4.61141 0.0 13.9017    
cufflinks 5.4946 0.0 16.1879    
cufflinks 6.13478 0.0 17.8051    
cufflinks 4.37613 0.0 13.3005   Low
cufflinks 6.61557 0.0 19.0594    
cufflinks 5.3251 0.0 15.7445    
cufflinks 5.95099 0.0 17.343    
cufflinks 0.781        
cufflinks 0.302       Low
cufflinks 0.832        
cufflinks 1.1        
cufflinks 1.159       High
cufflinks 0.946        
cufflinks 0.635        
cufflinks 0.56        
cufflinks 0.653        
cufflinks 1.834       High
cufflinks 0.39       Low
cufflinks 0.471        
cufflinks 0.542        
cufflinks 1.296       High
cufflinks 0.348       Low
cufflinks 0.517        
cufflinks 0.507        

0 Strain