Gene : Glyma.06G100700 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.4.2.29 - tRNA-guanine(34) transglycosylase / tRNA transglycosylase Genomic Order:  1007
Name:  ? Glyma.06G100700 Secondary Identifier:  ? PAC:30550926
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G100700 0.5kb upstream 0.5kb upstream 9767 true Chr06: 7993321-8003087 Glycine max
Glyma.06G100700 0.5kb upstream 0.5kb upstream 500 false Chr06: 7993321-7993820 Glycine max
Glyma.06G100700 0.5kb downstream 0.5kb downstream 9767 true Chr06: 7993821-8003587 Glycine max
Glyma.06G100700 0.5kb downstream 0.5kb downstream 500 false Chr06: 8003088-8003587 Glycine max
Glyma.06G100700 1.0kb upstream 1.0kb upstream 10267 true Chr06: 7992821-8003087 Glycine max
Glyma.06G100700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7992821-7993820 Glycine max
Glyma.06G100700 1.0kb downstream 1.0kb downstream 10267 true Chr06: 7993821-8004087 Glycine max
Glyma.06G100700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8003088-8004087 Glycine max
Glyma.06G100700 2.0kb upstream 2.0kb upstream 11267 true Chr06: 7991821-8003087 Glycine max
Glyma.06G100700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7991821-7993820 Glycine max
Glyma.06G100700 2.0kb downstream 2.0kb downstream 11267 true Chr06: 7993821-8005087 Glycine max
Glyma.06G100700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8003088-8005087 Glycine max
Glyma.06G100700 5.0kb upstream 5.0kb upstream 14267 true Chr06: 7988821-8003087 Glycine max
Glyma.06G100700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7988821-7993820 Glycine max
Glyma.06G100700 5.0kb downstream 5.0kb downstream 14267 true Chr06: 7993821-8008087 Glycine max
Glyma.06G100700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8003088-8008087 Glycine max
Glyma.06G100700 10.0kb upstream 10.0kb upstream 19267 true Chr06: 7983821-8003087 Glycine max
Glyma.06G100700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7983821-7993820 Glycine max
Glyma.06G100700 10.0kb downstream 10.0kb downstream 19267 true Chr06: 7993821-8013087 Glycine max
Glyma.06G100700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8003088-8013087 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303597 5265 Fabidae View MSA
124070956 5270 Rosid View MSA
123742593 5271 Pentapetalae View MSA
122795141 5272 Eudicot View MSA
122048570 5273 Angiosperm View MSA
121348246 5274 Embryophyte View MSA
123425723 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.25461 0.0 11.7042   High
cufflinks 1.59437 0.0 7.87792    
cufflinks 1.97733 0.0 10.7705    
cufflinks 1.51566 0.0 9.05417    
cufflinks 2.03443 0.0 9.24159    
cufflinks 0.845538 0.0 4.92814   Low
cufflinks 0.805093 0.0 4.59971   Low
cufflinks 1.00669 0.0 6.62384    
cufflinks 1.25538 0.0 9.73548    
cufflinks 0.098     Low  
cufflinks 0.176        
cufflinks 0.203       High
cufflinks 0.159        
cufflinks 0.134        
cufflinks 0.089       Low
cufflinks 0.113        
cufflinks 0.19        
cufflinks 0.245       High
cufflinks 0.167        
cufflinks 0.083     Low Low
cufflinks 0.131        
cufflinks 0.096        
cufflinks 0.147        
cufflinks 0.184        
cufflinks 0.075     Low Low
cufflinks 0.129        

0 Strain