Gene : Glyma.06G097400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11207//PTHR11207:SF1 - RIBONUCLEASE III Genomic Order:  974
Name:  ? Glyma.06G097400 Secondary Identifier:  ? PAC:30553871
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G097400 0.5kb upstream 0.5kb upstream 4096 true Chr06: 7700206-7704301 Glycine max
Glyma.06G097400 0.5kb upstream 0.5kb upstream 500 false Chr06: 7700206-7700705 Glycine max
Glyma.06G097400 0.5kb downstream 0.5kb downstream 4096 true Chr06: 7700706-7704801 Glycine max
Glyma.06G097400 0.5kb downstream 0.5kb downstream 500 false Chr06: 7704302-7704801 Glycine max
Glyma.06G097400 1.0kb upstream 1.0kb upstream 4596 true Chr06: 7699706-7704301 Glycine max
Glyma.06G097400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7699706-7700705 Glycine max
Glyma.06G097400 1.0kb downstream 1.0kb downstream 4596 true Chr06: 7700706-7705301 Glycine max
Glyma.06G097400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7704302-7705301 Glycine max
Glyma.06G097400 2.0kb upstream 2.0kb upstream 5596 true Chr06: 7698706-7704301 Glycine max
Glyma.06G097400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7698706-7700705 Glycine max
Glyma.06G097400 2.0kb downstream 2.0kb downstream 5596 true Chr06: 7700706-7706301 Glycine max
Glyma.06G097400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7704302-7706301 Glycine max
Glyma.06G097400 5.0kb upstream 5.0kb upstream 8596 true Chr06: 7695706-7704301 Glycine max
Glyma.06G097400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7695706-7700705 Glycine max
Glyma.06G097400 5.0kb downstream 5.0kb downstream 8596 true Chr06: 7700706-7709301 Glycine max
Glyma.06G097400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7704302-7709301 Glycine max
Glyma.06G097400 10.0kb upstream 10.0kb upstream 13596 true Chr06: 7690706-7704301 Glycine max
Glyma.06G097400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7690706-7700705 Glycine max
Glyma.06G097400 10.0kb downstream 10.0kb downstream 13596 true Chr06: 7700706-7714301 Glycine max
Glyma.06G097400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7704302-7714301 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313024 5265 Fabidae View MSA
124069666 5270 Rosid View MSA
123748285 5271 Pentapetalae View MSA
122797580 5272 Eudicot View MSA
122051528 5273 Angiosperm View MSA
121350362 5274 Embryophyte View MSA
123381695 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.87047 0.0 15.0706    
cufflinks 4.19419 0.0 15.9604    
cufflinks 2.75609 0.0 11.8819   Low
cufflinks 4.12605 0.0 15.7032    
cufflinks 4.88858 0.0 17.7571    
cufflinks 5.0753 0.0 19.2592    
cufflinks 4.26995 0.0 16.214    
cufflinks 6.28706 0.0 21.2779   High
cufflinks 5.10305 0.0 18.3006    
cufflinks 2.341       High
cufflinks 0.461        
cufflinks 1.119        
cufflinks 1.953       High
cufflinks 1.806       High
cufflinks 0.48        
cufflinks 0.654        
cufflinks 0.54        
cufflinks 1.457       High
cufflinks 0.896        
cufflinks 0.631        
cufflinks 0.384       Low
cufflinks 0.665        
cufflinks 1.047        
cufflinks 0.449        
cufflinks 0.554        
cufflinks 0.412       Low

0 Strain