Gene : Glyma.06G130200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33868:SF2 - EXPRESSED PROTEIN Genomic Order:  1302
Name:  ? Glyma.06G130200 Secondary Identifier:  ? PAC:30550233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G130200 0.5kb upstream 0.5kb upstream 4852 true Chr06: 10701746-10706597 Glycine max
Glyma.06G130200 0.5kb upstream 0.5kb upstream 500 false Chr06: 10706098-10706597 Glycine max
Glyma.06G130200 0.5kb downstream 0.5kb downstream 4852 true Chr06: 10701246-10706097 Glycine max
Glyma.06G130200 0.5kb downstream 0.5kb downstream 500 false Chr06: 10701246-10701745 Glycine max
Glyma.06G130200 1.0kb upstream 1.0kb upstream 5352 true Chr06: 10701746-10707097 Glycine max
Glyma.06G130200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10706098-10707097 Glycine max
Glyma.06G130200 1.0kb downstream 1.0kb downstream 5352 true Chr06: 10700746-10706097 Glycine max
Glyma.06G130200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10700746-10701745 Glycine max
Glyma.06G130200 2.0kb upstream 2.0kb upstream 6352 true Chr06: 10701746-10708097 Glycine max
Glyma.06G130200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10706098-10708097 Glycine max
Glyma.06G130200 2.0kb downstream 2.0kb downstream 6352 true Chr06: 10699746-10706097 Glycine max
Glyma.06G130200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10699746-10701745 Glycine max
Glyma.06G130200 5.0kb upstream 5.0kb upstream 9352 true Chr06: 10701746-10711097 Glycine max
Glyma.06G130200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10706098-10711097 Glycine max
Glyma.06G130200 5.0kb downstream 5.0kb downstream 9352 true Chr06: 10696746-10706097 Glycine max
Glyma.06G130200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10696746-10701745 Glycine max
Glyma.06G130200 10.0kb upstream 10.0kb upstream 14352 true Chr06: 10701746-10716097 Glycine max
Glyma.06G130200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10706098-10716097 Glycine max
Glyma.06G130200 10.0kb downstream 10.0kb downstream 14352 true Chr06: 10691746-10706097 Glycine max
Glyma.06G130200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10691746-10701745 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301867 5265 Fabidae View MSA
124070490 5270 Rosid View MSA
123747466 5271 Pentapetalae View MSA
122788794 5272 Eudicot View MSA
122043778 5273 Angiosperm View MSA
121348592 5274 Embryophyte View MSA
123380930 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4617 0.0 50.462    
cufflinks 3.34428 0.0 16.1171   Low
cufflinks 35.1165 0.0 150.214 High High
cufflinks 3.84444 0.0 17.6021   Low
cufflinks 10.1782 0.0 40.2045    
cufflinks 16.3617 0.0 63.5905    
cufflinks 8.65082 0.0 34.2345    
cufflinks 9.52196 0.0 35.8943    
cufflinks 3.92584 0.0 15.763   Low
cufflinks 0.624        
cufflinks 0.251        
cufflinks 2.345       High
cufflinks 0.551        
cufflinks 0.256        
cufflinks 0.057       Low
cufflinks 0.515        
cufflinks 0.441        
cufflinks 0.751        
cufflinks 0.402        
cufflinks 0.539        
cufflinks 0.154       Low
cufflinks 0.751        
cufflinks 0.562        
cufflinks 0.484        
cufflinks 0.491        
cufflinks 0.33        

0 Strain