Gene : Glyma.06G131600 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  1316
Name:  ? Glyma.06G131600 Secondary Identifier:  ? PAC:30553202
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G131600 0.5kb upstream 0.5kb upstream 3016 true Chr06: 10842481-10845496 Glycine max
Glyma.06G131600 0.5kb upstream 0.5kb upstream 500 false Chr06: 10844997-10845496 Glycine max
Glyma.06G131600 0.5kb downstream 0.5kb downstream 3016 true Chr06: 10841981-10844996 Glycine max
Glyma.06G131600 0.5kb downstream 0.5kb downstream 500 false Chr06: 10841981-10842480 Glycine max
Glyma.06G131600 1.0kb upstream 1.0kb upstream 3516 true Chr06: 10842481-10845996 Glycine max
Glyma.06G131600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10844997-10845996 Glycine max
Glyma.06G131600 1.0kb downstream 1.0kb downstream 3516 true Chr06: 10841481-10844996 Glycine max
Glyma.06G131600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10841481-10842480 Glycine max
Glyma.06G131600 2.0kb upstream 2.0kb upstream 4516 true Chr06: 10842481-10846996 Glycine max
Glyma.06G131600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10844997-10846996 Glycine max
Glyma.06G131600 2.0kb downstream 2.0kb downstream 4516 true Chr06: 10840481-10844996 Glycine max
Glyma.06G131600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10840481-10842480 Glycine max
Glyma.06G131600 5.0kb upstream 5.0kb upstream 7516 true Chr06: 10842481-10849996 Glycine max
Glyma.06G131600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10844997-10849996 Glycine max
Glyma.06G131600 5.0kb downstream 5.0kb downstream 7516 true Chr06: 10837481-10844996 Glycine max
Glyma.06G131600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10837481-10842480 Glycine max
Glyma.06G131600 10.0kb upstream 10.0kb upstream 12516 true Chr06: 10842481-10854996 Glycine max
Glyma.06G131600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10844997-10854996 Glycine max
Glyma.06G131600 10.0kb downstream 10.0kb downstream 12516 true Chr06: 10832481-10844996 Glycine max
Glyma.06G131600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10832481-10842480 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041337 5273 Angiosperm View MSA
122303063 5265 Fabidae View MSA
124072414 5270 Rosid View MSA
123752615 5271 Pentapetalae View MSA
122791285 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121343957 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.35613 0.0 27.6227    
cufflinks 8.84197 0.0 26.208    
cufflinks 30.6765 0.0 81.9931 High High
cufflinks 9.8843 0.0 28.8597    
cufflinks 10.4554 0.0 30.4614    
cufflinks 60.7349 0.0 163.885 High High
cufflinks 3.89343 0.0 13.0125   Low
cufflinks 16.4463 0.0 45.4374    
cufflinks 15.2703 0.0 42.496    
cufflinks 4.078        
cufflinks 29.964     High High
cufflinks 9.225     High  
cufflinks 6.205        
cufflinks 2.947       Low
cufflinks 11.426     High  
cufflinks 5.023        
cufflinks 4.711        
cufflinks 4.732        
cufflinks 3.838        
cufflinks 6.545        
cufflinks 30.244     High High
cufflinks 5.433        
cufflinks 3.308       Low
cufflinks 20.963     High High
cufflinks 6.013        
cufflinks 10.815     High  

0 Strain