Gene : Glyma.06G118000 G. max Wm82.a2.v1
Defline:  (1 of 2) PF10664 - Cyanobacterial and plastid NDH-1 subunit M (NdhM) Genomic Order:  1180
Name:  ? Glyma.06G118000 Secondary Identifier:  ? PAC:30550433
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G118000 0.5kb upstream 0.5kb upstream 2292 true Chr06: 9611351-9613642 Glycine max
Glyma.06G118000 0.5kb upstream 0.5kb upstream 500 false Chr06: 9611351-9611850 Glycine max
Glyma.06G118000 0.5kb downstream 0.5kb downstream 2292 true Chr06: 9611851-9614142 Glycine max
Glyma.06G118000 0.5kb downstream 0.5kb downstream 500 false Chr06: 9613643-9614142 Glycine max
Glyma.06G118000 1.0kb upstream 1.0kb upstream 2792 true Chr06: 9610851-9613642 Glycine max
Glyma.06G118000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9610851-9611850 Glycine max
Glyma.06G118000 1.0kb downstream 1.0kb downstream 2792 true Chr06: 9611851-9614642 Glycine max
Glyma.06G118000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9613643-9614642 Glycine max
Glyma.06G118000 2.0kb upstream 2.0kb upstream 3792 true Chr06: 9609851-9613642 Glycine max
Glyma.06G118000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9609851-9611850 Glycine max
Glyma.06G118000 2.0kb downstream 2.0kb downstream 3792 true Chr06: 9611851-9615642 Glycine max
Glyma.06G118000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9613643-9615642 Glycine max
Glyma.06G118000 5.0kb upstream 5.0kb upstream 6792 true Chr06: 9606851-9613642 Glycine max
Glyma.06G118000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9606851-9611850 Glycine max
Glyma.06G118000 5.0kb downstream 5.0kb downstream 6792 true Chr06: 9611851-9618642 Glycine max
Glyma.06G118000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9613643-9618642 Glycine max
Glyma.06G118000 10.0kb upstream 10.0kb upstream 11792 true Chr06: 9601851-9613642 Glycine max
Glyma.06G118000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9601851-9611850 Glycine max
Glyma.06G118000 10.0kb downstream 10.0kb downstream 11792 true Chr06: 9611851-9623642 Glycine max
Glyma.06G118000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9613643-9623642 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305303 5265 Fabidae View MSA
124065919 5270 Rosid View MSA
123737483 5271 Pentapetalae View MSA
122788912 5272 Eudicot View MSA
122048776 5273 Angiosperm View MSA
121347175 5274 Embryophyte View MSA
123380502 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.7138 0.0 92.99 High High
cufflinks 7.62843 0.0 21.9749    
cufflinks 1.51511 0.0 5.33046    
cufflinks 4.9618 0.0 15.108    
cufflinks 0.153177 0.0 0.60554 Low Low
cufflinks 0.368859 0.0 1.40715    
cufflinks 0.577984 0.0 2.16025    
cufflinks 0.932426 0.0 3.39332    
cufflinks 0.160137 0.0 0.631746 Low Low
cufflinks 0.794        
cufflinks 0.043     Low Low
cufflinks 2.056        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 27.038     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.539        
cufflinks 3.258        
cufflinks 29.736     High High
cufflinks 0.047     Low Low
cufflinks 27.654     High High
cufflinks 14.653     High  
cufflinks 0.064        
cufflinks 32.322     High High
cufflinks 0.046     Low Low

0 Strain