Gene : Glyma.06G120100 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1201
Name:  ? Glyma.06G120100 Secondary Identifier:  ? PAC:30554259
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G120100 0.5kb upstream 0.5kb upstream 2393 true Chr06: 9769609-9772001 Glycine max
Glyma.06G120100 0.5kb upstream 0.5kb upstream 500 false Chr06: 9769609-9770108 Glycine max
Glyma.06G120100 0.5kb downstream 0.5kb downstream 2393 true Chr06: 9770109-9772501 Glycine max
Glyma.06G120100 0.5kb downstream 0.5kb downstream 500 false Chr06: 9772002-9772501 Glycine max
Glyma.06G120100 1.0kb upstream 1.0kb upstream 2893 true Chr06: 9769109-9772001 Glycine max
Glyma.06G120100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9769109-9770108 Glycine max
Glyma.06G120100 1.0kb downstream 1.0kb downstream 2893 true Chr06: 9770109-9773001 Glycine max
Glyma.06G120100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9772002-9773001 Glycine max
Glyma.06G120100 2.0kb upstream 2.0kb upstream 3893 true Chr06: 9768109-9772001 Glycine max
Glyma.06G120100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9768109-9770108 Glycine max
Glyma.06G120100 2.0kb downstream 2.0kb downstream 3893 true Chr06: 9770109-9774001 Glycine max
Glyma.06G120100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9772002-9774001 Glycine max
Glyma.06G120100 5.0kb upstream 5.0kb upstream 6893 true Chr06: 9765109-9772001 Glycine max
Glyma.06G120100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9765109-9770108 Glycine max
Glyma.06G120100 5.0kb downstream 5.0kb downstream 6893 true Chr06: 9770109-9777001 Glycine max
Glyma.06G120100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9772002-9777001 Glycine max
Glyma.06G120100 10.0kb upstream 10.0kb upstream 11893 true Chr06: 9760109-9772001 Glycine max
Glyma.06G120100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9760109-9770108 Glycine max
Glyma.06G120100 10.0kb downstream 10.0kb downstream 11893 true Chr06: 9770109-9782001 Glycine max
Glyma.06G120100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9772002-9782001 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310036 5265 Fabidae View MSA
124070457 5270 Rosid View MSA
123736471 5271 Pentapetalae View MSA
122786011 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0875 0.0 3.83247   High
cufflinks 0.963469 0.0 3.42252   High
cufflinks 0.884982 0.0 3.15374    
cufflinks 0.54964 0.0 2.02401    
cufflinks 0.438792 0.0 1.63638   Low
cufflinks 0.516772 0.0 1.90909    
cufflinks 0.576763 0.0 2.12101    
cufflinks 0.398827 0.0 1.49204   Low
cufflinks 0.677163 0.0 2.46332    
cufflinks 0.629        
cufflinks 0.553       Low
cufflinks 1.611       High
cufflinks 0.729        
cufflinks 1.218       High
cufflinks 0.665        
cufflinks 0.942        
cufflinks 0.951        
cufflinks 1.366       High
cufflinks 1.189       High
cufflinks 0.744        
cufflinks 0.555       Low
cufflinks 0.717        
cufflinks 0.689        
cufflinks 0.56       Low
cufflinks 0.827        
cufflinks 0.566       Low

0 Strain