Gene : Glyma.06G162200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC Genomic Order:  1622
Name:  ? Glyma.06G162200 Secondary Identifier:  ? PAC:30549898
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G162200 0.5kb upstream 0.5kb upstream 7588 true Chr06: 13392012-13399599 Glycine max
Glyma.06G162200 0.5kb upstream 0.5kb upstream 500 false Chr06: 13399100-13399599 Glycine max
Glyma.06G162200 0.5kb downstream 0.5kb downstream 7588 true Chr06: 13391512-13399099 Glycine max
Glyma.06G162200 0.5kb downstream 0.5kb downstream 500 false Chr06: 13391512-13392011 Glycine max
Glyma.06G162200 1.0kb upstream 1.0kb upstream 8088 true Chr06: 13392012-13400099 Glycine max
Glyma.06G162200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13399100-13400099 Glycine max
Glyma.06G162200 1.0kb downstream 1.0kb downstream 8088 true Chr06: 13391012-13399099 Glycine max
Glyma.06G162200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13391012-13392011 Glycine max
Glyma.06G162200 2.0kb upstream 2.0kb upstream 9088 true Chr06: 13392012-13401099 Glycine max
Glyma.06G162200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13399100-13401099 Glycine max
Glyma.06G162200 2.0kb downstream 2.0kb downstream 9088 true Chr06: 13390012-13399099 Glycine max
Glyma.06G162200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13390012-13392011 Glycine max
Glyma.06G162200 5.0kb upstream 5.0kb upstream 12088 true Chr06: 13392012-13404099 Glycine max
Glyma.06G162200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13399100-13404099 Glycine max
Glyma.06G162200 5.0kb downstream 5.0kb downstream 12088 true Chr06: 13387012-13399099 Glycine max
Glyma.06G162200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13387012-13392011 Glycine max
Glyma.06G162200 10.0kb upstream 10.0kb upstream 17088 true Chr06: 13392012-13409099 Glycine max
Glyma.06G162200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13399100-13409099 Glycine max
Glyma.06G162200 10.0kb downstream 10.0kb downstream 17088 true Chr06: 13382012-13399099 Glycine max
Glyma.06G162200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13382012-13392011 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041323 5273 Angiosperm View MSA
122299430 5265 Fabidae View MSA
124066848 5270 Rosid View MSA
123740697 5271 Pentapetalae View MSA
122787992 5272 Eudicot View MSA
121345985 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9897 0.0 79.8497   High
cufflinks 1.40208 0.0 6.19561    
cufflinks 117.164 0.0 1097.32 High High
cufflinks 1.23673 0.0 7.97433    
cufflinks 1.87335 0.0 7.2904    
cufflinks 5.41818 0.0 16.5907    
cufflinks 0.79122 0.0 3.03625   Low
cufflinks 3.77988 0.0 14.1623    
cufflinks 2.25832 0.0 8.28742    
cufflinks 0.481        
cufflinks 3.227       High
cufflinks 8.1     High High
cufflinks 0.36       Low
cufflinks 0.276       Low
cufflinks 1.155        
cufflinks 0.395        
cufflinks 4.021       High
cufflinks 1.203        
cufflinks 0.339       Low
cufflinks 0.524        
cufflinks 1.924        
cufflinks 0.839        
cufflinks 1.079        
cufflinks 4.689       High
cufflinks 0.458        
cufflinks 2.987        

0 Strain