Protein Family : CLPC homologue 1 123426532

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  213

213 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30147.t000644 (1 of 1) PTHR11638//PTHR11638:SF118 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPD, CHLOROPLASTIC R. communis v0.1 5080   30147: 1570551-1575630
30147.t000691 (1 of 3) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) R. communis v0.1 5049   30147: 1835693-1840741
Cucsa.156930 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC C. sativus v1.0 10073   scaffold01141: 63876-73948
Cucsa.213720 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC C. sativus v1.0 6476   scaffold01543: 1579131-1585606
Cucsa.334360 (1 of 1) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC C. sativus v1.0 13832   scaffold03306: 409667-423498
orange1.1g003088m.g (1 of 1) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC C. sinensis v1.1 4777   scaffold00087: 243680-248456
orange1.1g003094m.g (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC C. sinensis v1.1 7562   scaffold00187: 251940-259501
AT5G50920 (1 of 3) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) A. thaliana TAIR10 CLPC1 4906   Chr5: 20715469-20720374
AT5G51070 (1 of 1) PTHR11638//PTHR11638:SF118 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPD, CHLOROPLASTIC A. thaliana TAIR10 ERD1 4367   Chr5: 20764315-20768681
AT3G48870 (1 of 3) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) A. thaliana TAIR10 HSP93-III 4546   Chr3: 18122197-18126742
Thhalv10010105m.g (1 of 3) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC E. salsugineum v1.0 4497   scaffold_16: 3347190-3351686
Thhalv10012591m.g (1 of 1) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC E. salsugineum v1.0 4466   scaffold_2: 14308565-14313030
Thhalv10012603m.g (1 of 3) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC E. salsugineum v1.0 4868   scaffold_2: 14562024-14566891
Ciclev10030863m.g (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC C. clementina v1.0 5985   scaffold_4: 13910899-13916883
Ciclev10030757m.g (1 of 1) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC C. clementina v1.0 5525   scaffold_4: 14510787-14516311
Lus10016723.g (1 of 2) PF00004//PF02151//PF02861//PF07728//PF10431 - ATPase family associated with various cellular activities (AAA) (AAA) // UvrB/uvrC motif (UVR) // Clp amino terminal domain, pathogenicity island component (Clp_N) // AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) L. usitatissimum v1.0 4051   scaffold903: 226266-230316
Lus10043013.g (1 of 3) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC L. usitatissimum v1.0 4652   scaffold25: 664044-668695
Lus10036017.g (1 of 2) PF00004//PF02151//PF02861//PF07728//PF10431 - ATPase family associated with various cellular activities (AAA) (AAA) // UvrB/uvrC motif (UVR) // Clp amino terminal domain, pathogenicity island component (Clp_N) // AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) L. usitatissimum v1.0 4168   scaffold76: 721924-726091
Gorai.001G054700 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC G. raimondii v2.1 4893   Chr01: 5249629-5254521
Gorai.001G053000 (1 of 2) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC G. raimondii v2.1 6211   Chr01: 5017785-5023995
Gorai.003G116200 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC G. raimondii v2.1 6077   Chr03: 35286363-35292439
Gorai.006G273600 (1 of 2) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC G. raimondii v2.1 5401   Chr06: 50960848-50966248
estExt_Genewise1Plus.C_50036 (1 of 1) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC C. subellipsoidea C-169 v2.0 9486   scaffold_5: 230362-239847
Genemark1.310_g (1 of 1) 3.6.4.10 - Non-chaperonin molecular chaperone ATPase / Molecular chaperone Hsc70 ATPase C. subellipsoidea C-169 v2.0 6012   scaffold_1: 1703889-1709900
MicpuC2.EuGene.0000070325 (1 of 1) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC M. pusilla CCMP1545 v3.0 4157   scaffold_7: 586043-590199
MicpuC2.fgenesh1_pm.C_scaffold_15000028 (1 of 1) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC M. pusilla CCMP1545 v3.0 3156   scaffold_15: 416205-419360
estExt_Genewise2.C_Chr_130355 (1 of 1) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC M. sp RCC299 v3.0 3552   Chr_13: 668954-672505
EuGene.0900010283 (1 of 1) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC M. sp RCC299 v3.0 3541   Chr_09: 564914-568454
eugene.2000010108 (1 of 1) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC O. lucimarinus v2.0 3288   Chr_20: 174788-178075
Thecc1EG014795 (1 of 1) PTHR11638//PTHR11638:SF118 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPD, CHLOROPLASTIC T. cacao v1.1 7054   scaffold_3: 24510614-24517667

213 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30147.m014373 R. communis v0.1 123426532 CLPC homologue 1 2 5275 Viridiplantae
30147.m014420 R. communis v0.1 123426532 CLPC homologue 1 2 5275 Viridiplantae
Cucsa.213720.1 C. sativus v1.0 123426532 CLPC homologue 1 3 5275 Viridiplantae
Cucsa.156930.1 C. sativus v1.0 123426532 CLPC homologue 1 3 5275 Viridiplantae
Cucsa.334360.1 C. sativus v1.0 123426532 CLPC homologue 1 3 5275 Viridiplantae
orange1.1g003088m C. sinensis v1.1 123426532 CLPC homologue 1 2 5275 Viridiplantae
orange1.1g003094m C. sinensis v1.1 123426532 CLPC homologue 1 2 5275 Viridiplantae
AT5G51070.1 A. thaliana TAIR10 123426532 CLPC homologue 1 3 5275 Viridiplantae
AT5G50920.1 A. thaliana TAIR10 123426532 CLPC homologue 1 3 5275 Viridiplantae
AT3G48870.1 A. thaliana TAIR10 123426532 CLPC homologue 1 3 5275 Viridiplantae
Thhalv10012591m E. salsugineum v1.0 123426532 CLPC homologue 1 3 5275 Viridiplantae
Thhalv10010105m E. salsugineum v1.0 123426532 CLPC homologue 1 3 5275 Viridiplantae
Thhalv10012603m E. salsugineum v1.0 123426532 CLPC homologue 1 3 5275 Viridiplantae
Ciclev10030863m C. clementina v1.0 123426532 CLPC homologue 1 2 5275 Viridiplantae
Ciclev10030757m C. clementina v1.0 123426532 CLPC homologue 1 2 5275 Viridiplantae
Lus10036017 L. usitatissimum v1.0 123426532 CLPC homologue 1 3 5275 Viridiplantae
Lus10043013 L. usitatissimum v1.0 123426532 CLPC homologue 1 3 5275 Viridiplantae
Lus10016723 L. usitatissimum v1.0 123426532 CLPC homologue 1 3 5275 Viridiplantae
Gorai.003G116200.1 G. raimondii v2.1 123426532 CLPC homologue 1 4 5275 Viridiplantae
Gorai.001G054700.1 G. raimondii v2.1 123426532 CLPC homologue 1 4 5275 Viridiplantae
Gorai.001G053000.1 G. raimondii v2.1 123426532 CLPC homologue 1 4 5275 Viridiplantae
Gorai.006G273600.1 G. raimondii v2.1 123426532 CLPC homologue 1 4 5275 Viridiplantae
55366 C. subellipsoidea C-169 v2.0 123426532 CLPC homologue 1 2 5275 Viridiplantae
28166 C. subellipsoidea C-169 v2.0 123426532 CLPC homologue 1 2 5275 Viridiplantae
59476 M. pusilla CCMP1545 v3.0 123426532 CLPC homologue 1 2 5275 Viridiplantae
44966 M. pusilla CCMP1545 v3.0 123426532 CLPC homologue 1 2 5275 Viridiplantae
92311 M. sp RCC299 v3.0 123426532 CLPC homologue 1 2 5275 Viridiplantae
61300 M. sp RCC299 v3.0 123426532 CLPC homologue 1 2 5275 Viridiplantae
29402 O. lucimarinus v2.0 123426532 CLPC homologue 1 1 5275 Viridiplantae
Thecc1EG014795t1 T. cacao v1.1 123426532 CLPC homologue 1 2 5275 Viridiplantae