Gene : CLPC1 A. thaliana TAIR10
Primary Identifier:  ? AT5G50920 Defline:  (1 of 3) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC)
Genomic Order:  4520 Name:  ? AT5G50920
Secondary Identifier:  ? PAC:19667446
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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G50920 0.5kb upstream 0.5kb upstream 5406 true Chr5: 20715469-20720874 Arabidopsis thaliana
AT5G50920 0.5kb upstream 0.5kb upstream 500 false Chr5: 20720375-20720874 Arabidopsis thaliana
AT5G50920 0.5kb downstream 0.5kb downstream 5406 true Chr5: 20714969-20720374 Arabidopsis thaliana
AT5G50920 0.5kb downstream 0.5kb downstream 500 false Chr5: 20714969-20715468 Arabidopsis thaliana
AT5G50920 1.0kb upstream 1.0kb upstream 5906 true Chr5: 20715469-20721374 Arabidopsis thaliana
AT5G50920 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20720375-20721374 Arabidopsis thaliana
AT5G50920 1.0kb downstream 1.0kb downstream 5906 true Chr5: 20714469-20720374 Arabidopsis thaliana
AT5G50920 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20714469-20715468 Arabidopsis thaliana
AT5G50920 2.0kb upstream 2.0kb upstream 6906 true Chr5: 20715469-20722374 Arabidopsis thaliana
AT5G50920 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20720375-20722374 Arabidopsis thaliana
AT5G50920 2.0kb downstream 2.0kb downstream 6906 true Chr5: 20713469-20720374 Arabidopsis thaliana
AT5G50920 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20713469-20715468 Arabidopsis thaliana
AT5G50920 5.0kb upstream 5.0kb upstream 9906 true Chr5: 20715469-20725374 Arabidopsis thaliana
AT5G50920 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20720375-20725374 Arabidopsis thaliana
AT5G50920 5.0kb downstream 5.0kb downstream 9906 true Chr5: 20710469-20720374 Arabidopsis thaliana
AT5G50920 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20710469-20715468 Arabidopsis thaliana
AT5G50920 10.0kb upstream 10.0kb upstream 14906 true Chr5: 20715469-20730374 Arabidopsis thaliana
AT5G50920 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20720375-20730374 Arabidopsis thaliana
AT5G50920 10.0kb downstream 10.0kb downstream 14906 true Chr5: 20705469-20720374 Arabidopsis thaliana
AT5G50920 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20705469-20715468 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374775 5261 Brassicaceae View MSA
123835966 5264 Brassicales-Malvales View MSA
124343164 5266 SBM View MSA
124254003 5268 Malvidae View MSA
124063020 5270 Rosid View MSA
123738110 5271 Pentapetalae View MSA
122796801 5272 Eudicot View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 382.881     High  
cufflinks 60.316     High  
cufflinks 504.272     High  
cufflinks 67.715     High  
cufflinks 591.556     High High
cufflinks 47.382     High Low

0 Strain