Protein Family : CLPC homologue 1 124254003

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  23
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23 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30147.t000691 (1 of 3) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) R. communis v0.1 5049   30147: 1835693-1840741
orange1.1g003094m.g (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC C. sinensis v1.1 7562   scaffold00187: 251940-259501
AT5G50920 (1 of 3) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) A. thaliana TAIR10 CLPC1 4906   Chr5: 20715469-20720374
Thhalv10012603m.g (1 of 3) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC E. salsugineum v1.0 4868   scaffold_2: 14562024-14566891
Ciclev10030863m.g (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC C. clementina v1.0 5985   scaffold_4: 13910899-13916883
Lus10016723.g (1 of 2) PF00004//PF02151//PF02861//PF07728//PF10431 - ATPase family associated with various cellular activities (AAA) (AAA) // UvrB/uvrC motif (UVR) // Clp amino terminal domain, pathogenicity island component (Clp_N) // AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) L. usitatissimum v1.0 4051   scaffold903: 226266-230316
Lus10036017.g (1 of 2) PF00004//PF02151//PF02861//PF07728//PF10431 - ATPase family associated with various cellular activities (AAA) (AAA) // UvrB/uvrC motif (UVR) // Clp amino terminal domain, pathogenicity island component (Clp_N) // AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) L. usitatissimum v1.0 4168   scaffold76: 721924-726091
Gorai.001G054700 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC G. raimondii v2.1 4893   Chr01: 5249629-5254521
Gorai.003G116200 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC G. raimondii v2.1 6077   Chr03: 35286363-35292439
Thecc1EG014739 (1 of 1) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC T. cacao v1.1 6921   scaffold_3: 24211311-24218231
Araha.7885s0002 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC A. halleri v1.1 4760   Scaffold7885: 4881-9640
Cagra.7393s0005 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC C. grandiflora v1.1 4845   Scaffold7393: 13913-18757
Brara.C01504 (1 of 1) PF00004//PF02151//PF02861//PF07728//PF10431 - ATPase family associated with various cellular activities (AAA) (AAA) // UvrB/uvrC motif (UVR) // Clp amino terminal domain, pathogenicity island component (Clp_N) // AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) B. rapa FPsc v1.3 4248   A03: 7242874-7247121
Bostr.15774s0233 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC B. stricta v1.2 5103   Scaffold15774: 2416873-2421975
SapurV1A.0672s0190 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC S. purpurea v1.0 7956   chr12: 10779729-10787684
SapurV1A.0774s0020 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC S. purpurea v1.0 6745   chr15: 19894747-19901491
Manes.06G125800 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC M. esculenta v6.1 6815   Chromosome06: 23323616-23330430
Manes.14G045700 (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC M. esculenta v6.1 7222   Chromosome14: 3643901-3651122
AL8G25110 (1 of 4) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) A. lyrata v2.1 4845   scaffold_8: 14214431-14219275
Potri.012G105900 (1 of 5) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) P. trichocarpa v3.1 6783   Chr12: 12969706-12976488
Potri.015G105100 (1 of 5) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) P. trichocarpa v3.1 6945   Chr15: 12301934-12308878
Podel.15G111700 (1 of 1) PF00004//PF02151//PF02861//PF07728//PF10431 - ATPase family associated with various cellular activities (AAA) (AAA) // UvrB/uvrC motif (UVR) // Clp amino terminal domain, pathogenicity island component (Clp_N) // AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) P. deltoides WV94 v2.1 6928   Chr15: 12645700-12652627
Carub.0008s1093 (1 of 2) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) C. rubella v1.1 4793   scaffold_8: 6670631-6675423

23 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30147.m014420 R. communis v0.1 124254003 CLPC homologue 1 1 5268 Malvidae
orange1.1g003094m C. sinensis v1.1 124254003 CLPC homologue 1 1 5268 Malvidae
Lus10016723 L. usitatissimum v1.0 124254003 CLPC homologue 1 2 5268 Malvidae
Gorai.003G116200.1 G. raimondii v2.1 124254003 CLPC homologue 1 2 5268 Malvidae
Gorai.001G054700.1 G. raimondii v2.1 124254003 CLPC homologue 1 2 5268 Malvidae
Thecc1EG014739t1 T. cacao v1.1 124254003 CLPC homologue 1 1 5268 Malvidae
Araha.7885s0002.1.p A. halleri v1.1 124254003 CLPC homologue 1 1 5268 Malvidae
Manes.06G125800.1.p M. esculenta v6.1 124254003 CLPC homologue 1 2 5268 Malvidae
AL8G25110.t1 A. lyrata v2.1 124254003 CLPC homologue 1 1 5268 Malvidae
Potri.012G105900.1.p P. trichocarpa v3.1 124254003 CLPC homologue 1 2 5268 Malvidae
AT5G50920.1 A. thaliana TAIR10 124254003 CLPC homologue 1 1 5268 Malvidae
Thhalv10012603m E. salsugineum v1.0 124254003 CLPC homologue 1 1 5268 Malvidae
Ciclev10030863m C. clementina v1.0 124254003 CLPC homologue 1 1 5268 Malvidae
Lus10036017 L. usitatissimum v1.0 124254003 CLPC homologue 1 2 5268 Malvidae
Cagra.7393s0005.1.p C. grandiflora v1.1 124254003 CLPC homologue 1 1 5268 Malvidae
Brara.C01504.1.p B. rapa FPsc v1.3 124254003 CLPC homologue 1 1 5268 Malvidae
Bostr.15774s0233.1.p B. stricta v1.2 124254003 CLPC homologue 1 1 5268 Malvidae
SapurV1A.0774s0020.1.p S. purpurea v1.0 124254003 CLPC homologue 1 2 5268 Malvidae
SapurV1A.0672s0190.1.p S. purpurea v1.0 124254003 CLPC homologue 1 2 5268 Malvidae
Manes.14G045700.1.p M. esculenta v6.1 124254003 CLPC homologue 1 2 5268 Malvidae
Potri.015G105100.3.p P. trichocarpa v3.1 124254003 CLPC homologue 1 2 5268 Malvidae
Podel.15G111700.1.p P. deltoides WV94 v2.1 124254003 CLPC homologue 1 1 5268 Malvidae
Carub.0008s1093.1.p C. rubella v1.1 124254003 CLPC homologue 1 1 5268 Malvidae