Gene : Brara.C01504 B. rapa FPsc v1.3
Defline:  (1 of 1) PF00004//PF02151//PF02861//PF07728//PF10431 - ATPase family associated with various cellular activities (AAA) (AAA) // UvrB/uvrC motif (UVR) // Clp amino terminal domain, pathogenicity island component (Clp_N) // AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) Genomic Order:  1504
Name:  ? Brara.C01504 Secondary Identifier:  ? PAC:30617741
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01504 0.5kb upstream 0.5kb upstream 4748 true A03: 7242374-7247121 Brassica rapa FPsc
Brara.C01504 0.5kb upstream 0.5kb upstream 500 false A03: 7242374-7242873 Brassica rapa FPsc
Brara.C01504 0.5kb downstream 0.5kb downstream 4748 true A03: 7242874-7247621 Brassica rapa FPsc
Brara.C01504 0.5kb downstream 0.5kb downstream 500 false A03: 7247122-7247621 Brassica rapa FPsc
Brara.C01504 1.0kb upstream 1.0kb upstream 5248 true A03: 7241874-7247121 Brassica rapa FPsc
Brara.C01504 1.0kb upstream 1.0kb upstream 1000 false A03: 7241874-7242873 Brassica rapa FPsc
Brara.C01504 1.0kb downstream 1.0kb downstream 5248 true A03: 7242874-7248121 Brassica rapa FPsc
Brara.C01504 1.0kb downstream 1.0kb downstream 1000 false A03: 7247122-7248121 Brassica rapa FPsc
Brara.C01504 2.0kb upstream 2.0kb upstream 6248 true A03: 7240874-7247121 Brassica rapa FPsc
Brara.C01504 2.0kb upstream 2.0kb upstream 2000 false A03: 7240874-7242873 Brassica rapa FPsc
Brara.C01504 2.0kb downstream 2.0kb downstream 6248 true A03: 7242874-7249121 Brassica rapa FPsc
Brara.C01504 2.0kb downstream 2.0kb downstream 2000 false A03: 7247122-7249121 Brassica rapa FPsc
Brara.C01504 5.0kb upstream 5.0kb upstream 9248 true A03: 7237874-7247121 Brassica rapa FPsc
Brara.C01504 5.0kb upstream 5.0kb upstream 5000 false A03: 7237874-7242873 Brassica rapa FPsc
Brara.C01504 5.0kb downstream 5.0kb downstream 9248 true A03: 7242874-7252121 Brassica rapa FPsc
Brara.C01504 5.0kb downstream 5.0kb downstream 5000 false A03: 7247122-7252121 Brassica rapa FPsc
Brara.C01504 10.0kb upstream 10.0kb upstream 14248 true A03: 7232874-7247121 Brassica rapa FPsc
Brara.C01504 10.0kb upstream 10.0kb upstream 10000 false A03: 7232874-7242873 Brassica rapa FPsc
Brara.C01504 10.0kb downstream 10.0kb downstream 14248 true A03: 7242874-7257121 Brassica rapa FPsc
Brara.C01504 10.0kb downstream 10.0kb downstream 10000 false A03: 7247122-7257121 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374775 5261 Brassicaceae View MSA
123835966 5264 Brassicales-Malvales View MSA
124343164 5266 SBM View MSA
124254003 5268 Malvidae View MSA
124063020 5270 Rosid View MSA
123738110 5271 Pentapetalae View MSA
122796801 5272 Eudicot View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier