Gene : Cagra.7393s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC Genomic Order:  5
Name:  ? Cagra.7393s0005 Secondary Identifier:  ? PAC:28913351
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7393s0005 0.5kb upstream 0.5kb upstream 5345 true Scaffold7393: 13413-18757 Capsella grandiflora
Cagra.7393s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold7393: 13413-13912 Capsella grandiflora
Cagra.7393s0005 0.5kb downstream 0.5kb downstream 5345 true Scaffold7393: 13913-19257 Capsella grandiflora
Cagra.7393s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold7393: 18758-19257 Capsella grandiflora
Cagra.7393s0005 1.0kb upstream 1.0kb upstream 5845 true Scaffold7393: 12913-18757 Capsella grandiflora
Cagra.7393s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold7393: 12913-13912 Capsella grandiflora
Cagra.7393s0005 1.0kb downstream 1.0kb downstream 5845 true Scaffold7393: 13913-19757 Capsella grandiflora
Cagra.7393s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold7393: 18758-19757 Capsella grandiflora
Cagra.7393s0005 2.0kb upstream 2.0kb upstream 6845 true Scaffold7393: 11913-18757 Capsella grandiflora
Cagra.7393s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold7393: 11913-13912 Capsella grandiflora
Cagra.7393s0005 2.0kb downstream 2.0kb downstream 6845 true Scaffold7393: 13913-20757 Capsella grandiflora
Cagra.7393s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold7393: 18758-20757 Capsella grandiflora
Cagra.7393s0005 5.0kb upstream 5.0kb upstream 9845 true Scaffold7393: 8913-18757 Capsella grandiflora
Cagra.7393s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold7393: 8913-13912 Capsella grandiflora
Cagra.7393s0005 5.0kb downstream 5.0kb downstream 9845 true Scaffold7393: 13913-23757 Capsella grandiflora
Cagra.7393s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold7393: 18758-23757 Capsella grandiflora
Cagra.7393s0005 10.0kb upstream 10.0kb upstream 14845 true Scaffold7393: 3913-18757 Capsella grandiflora
Cagra.7393s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold7393: 3913-13912 Capsella grandiflora
Cagra.7393s0005 10.0kb downstream 10.0kb downstream 14845 true Scaffold7393: 13913-28757 Capsella grandiflora
Cagra.7393s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold7393: 18758-28757 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374775 5261 Brassicaceae View MSA
123835966 5264 Brassicales-Malvales View MSA
124343164 5266 SBM View MSA
124254003 5268 Malvidae View MSA
124063020 5270 Rosid View MSA
123738110 5271 Pentapetalae View MSA
122796801 5272 Eudicot View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain