Gene : Araha.7885s0002 A. halleri v1.1

Defline:  (1 of 2) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC Genomic Order:  2
Name:  ? Araha.7885s0002 Secondary Identifier:  ? PAC:28862342

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7885s0002 0.5kb upstream 0.5kb upstream 5260 true Scaffold7885: 4381-9640 Arabidopsis halleri
Araha.7885s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold7885: 4381-4880 Arabidopsis halleri
Araha.7885s0002 0.5kb downstream 0.5kb downstream 5260 true Scaffold7885: 4881-10140 Arabidopsis halleri
Araha.7885s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold7885: 9641-10140 Arabidopsis halleri
Araha.7885s0002 1.0kb upstream 1.0kb upstream 5760 true Scaffold7885: 3881-9640 Arabidopsis halleri
Araha.7885s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold7885: 3881-4880 Arabidopsis halleri
Araha.7885s0002 1.0kb downstream 1.0kb downstream 5760 true Scaffold7885: 4881-10640 Arabidopsis halleri
Araha.7885s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold7885: 9641-10640 Arabidopsis halleri
Araha.7885s0002 2.0kb upstream 2.0kb upstream 6760 true Scaffold7885: 2881-9640 Arabidopsis halleri
Araha.7885s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold7885: 2881-4880 Arabidopsis halleri
Araha.7885s0002 2.0kb downstream 2.0kb downstream 6760 true Scaffold7885: 4881-11640 Arabidopsis halleri
Araha.7885s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold7885: 9641-11640 Arabidopsis halleri
Araha.7885s0002 5.0kb upstream 5.0kb upstream 9640 true Scaffold7885: 1-9640 Arabidopsis halleri
Araha.7885s0002 5.0kb upstream 5.0kb upstream 4880 false Scaffold7885: 1-4880 Arabidopsis halleri
Araha.7885s0002 5.0kb downstream 5.0kb downstream 9760 true Scaffold7885: 4881-14640 Arabidopsis halleri
Araha.7885s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold7885: 9641-14640 Arabidopsis halleri
Araha.7885s0002 10.0kb upstream 10.0kb upstream 9640 true Scaffold7885: 1-9640 Arabidopsis halleri
Araha.7885s0002 10.0kb upstream 10.0kb upstream 4880 false Scaffold7885: 1-4880 Arabidopsis halleri
Araha.7885s0002 10.0kb downstream 10.0kb downstream 14760 true Scaffold7885: 4881-19640 Arabidopsis halleri
Araha.7885s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold7885: 9641-19640 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374775 5261 Brassicaceae View MSA
123835966 5264 Brassicales-Malvales View MSA
124343164 5266 SBM View MSA
124254003 5268 Malvidae View MSA
124063020 5270 Rosid View MSA
123738110 5271 Pentapetalae View MSA
122796801 5272 Eudicot View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain