Gene : Glyma.06G162600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11073:SF1 - CALNEXIN 14D-RELATED Genomic Order:  1626
Name:  ? Glyma.06G162600 Secondary Identifier:  ? PAC:30551236
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G162600 0.5kb upstream 0.5kb upstream 4267 true Chr06: 13445294-13449560 Glycine max
Glyma.06G162600 0.5kb upstream 0.5kb upstream 500 false Chr06: 13449061-13449560 Glycine max
Glyma.06G162600 0.5kb downstream 0.5kb downstream 4267 true Chr06: 13444794-13449060 Glycine max
Glyma.06G162600 0.5kb downstream 0.5kb downstream 500 false Chr06: 13444794-13445293 Glycine max
Glyma.06G162600 1.0kb upstream 1.0kb upstream 4767 true Chr06: 13445294-13450060 Glycine max
Glyma.06G162600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13449061-13450060 Glycine max
Glyma.06G162600 1.0kb downstream 1.0kb downstream 4767 true Chr06: 13444294-13449060 Glycine max
Glyma.06G162600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13444294-13445293 Glycine max
Glyma.06G162600 2.0kb upstream 2.0kb upstream 5767 true Chr06: 13445294-13451060 Glycine max
Glyma.06G162600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13449061-13451060 Glycine max
Glyma.06G162600 2.0kb downstream 2.0kb downstream 5767 true Chr06: 13443294-13449060 Glycine max
Glyma.06G162600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13443294-13445293 Glycine max
Glyma.06G162600 5.0kb upstream 5.0kb upstream 8767 true Chr06: 13445294-13454060 Glycine max
Glyma.06G162600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13449061-13454060 Glycine max
Glyma.06G162600 5.0kb downstream 5.0kb downstream 8767 true Chr06: 13440294-13449060 Glycine max
Glyma.06G162600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13440294-13445293 Glycine max
Glyma.06G162600 10.0kb upstream 10.0kb upstream 13767 true Chr06: 13445294-13459060 Glycine max
Glyma.06G162600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13449061-13459060 Glycine max
Glyma.06G162600 10.0kb downstream 10.0kb downstream 13767 true Chr06: 13435294-13449060 Glycine max
Glyma.06G162600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13435294-13445293 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313038 5265 Fabidae View MSA
124065141 5270 Rosid View MSA
123737774 5271 Pentapetalae View MSA
122786584 5272 Eudicot View MSA
122045156 5273 Angiosperm View MSA
121344983 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.146 0.0 457.663 High  
cufflinks 48.5673 0.0 232.568 High Low
cufflinks 34.7972 0.0 150.55 High Low
cufflinks 89.9247 0.0 501.433 High  
cufflinks 125.952 0.0 837.695 High  
cufflinks 171.47 0.0 1394.68 High High
cufflinks 184.628 0.0 1569.05 High High
cufflinks 79.6567 0.0 421.366 High  
cufflinks 103.701 0.0 612.567 High  
cufflinks 24.933     High  
cufflinks 8.805     High  
cufflinks 15.93     High  
cufflinks 48.879     High High
cufflinks 63.813     High High
cufflinks 8.45     High  
cufflinks 5.773        
cufflinks 6.055        
cufflinks 20.748     High  
cufflinks 16.808     High  
cufflinks 3.369       Low
cufflinks 6.727     High  
cufflinks 5.458        
cufflinks 13.389     High  
cufflinks 8.649     High  
cufflinks 3.94       Low
cufflinks 6.29        

0 Strain