Gene : Glyma.06G163700 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1637
Name:  ? Glyma.06G163700 Secondary Identifier:  ? PAC:30552949
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G163700 0.5kb upstream 0.5kb upstream 3048 true Chr06: 13525005-13528052 Glycine max
Glyma.06G163700 0.5kb upstream 0.5kb upstream 500 false Chr06: 13527553-13528052 Glycine max
Glyma.06G163700 0.5kb downstream 0.5kb downstream 3048 true Chr06: 13524505-13527552 Glycine max
Glyma.06G163700 0.5kb downstream 0.5kb downstream 500 false Chr06: 13524505-13525004 Glycine max
Glyma.06G163700 1.0kb upstream 1.0kb upstream 3548 true Chr06: 13525005-13528552 Glycine max
Glyma.06G163700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13527553-13528552 Glycine max
Glyma.06G163700 1.0kb downstream 1.0kb downstream 3548 true Chr06: 13524005-13527552 Glycine max
Glyma.06G163700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13524005-13525004 Glycine max
Glyma.06G163700 2.0kb upstream 2.0kb upstream 4548 true Chr06: 13525005-13529552 Glycine max
Glyma.06G163700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13527553-13529552 Glycine max
Glyma.06G163700 2.0kb downstream 2.0kb downstream 4548 true Chr06: 13523005-13527552 Glycine max
Glyma.06G163700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13523005-13525004 Glycine max
Glyma.06G163700 5.0kb upstream 5.0kb upstream 7548 true Chr06: 13525005-13532552 Glycine max
Glyma.06G163700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13527553-13532552 Glycine max
Glyma.06G163700 5.0kb downstream 5.0kb downstream 7548 true Chr06: 13520005-13527552 Glycine max
Glyma.06G163700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13520005-13525004 Glycine max
Glyma.06G163700 10.0kb upstream 10.0kb upstream 12548 true Chr06: 13525005-13537552 Glycine max
Glyma.06G163700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13527553-13537552 Glycine max
Glyma.06G163700 10.0kb downstream 10.0kb downstream 12548 true Chr06: 13515005-13527552 Glycine max
Glyma.06G163700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13515005-13525004 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311790 5265 Fabidae View MSA
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.61742 0.0 19.5822   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.422573 0.0 1.60263    
cufflinks 0.019813 0.0 0.0889057 Low Low
cufflinks 0.0480774 0.0 0.201197 Low  
cufflinks 0.862414 0.0 3.17125    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0564299 0.0 0.233588 Low  
cufflinks 0.194        
cufflinks 1.923       High
cufflinks 0.192        
cufflinks 0.038     Low  
cufflinks 0.102        
cufflinks 0.125        
cufflinks 0.021     Low Low
cufflinks 0.081        
cufflinks 0.008     Low Low
cufflinks 0.113        
cufflinks 0.064     Low  
cufflinks 2.404       High
cufflinks 0.082     Low  
cufflinks 0.251        
cufflinks 3.907       High
cufflinks 0.021     Low Low
cufflinks 0.343        

0 Strain