Gene : Glyma.06G165100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10887//PTHR10887:SF372 - DNA2/NAM7 HELICASE FAMILY Genomic Order:  1651
Name:  ? Glyma.06G165100 Secondary Identifier:  ? PAC:30549271
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G165100 0.5kb upstream 0.5kb upstream 3853 true Chr06: 13689518-13693370 Glycine max
Glyma.06G165100 0.5kb upstream 0.5kb upstream 500 false Chr06: 13689518-13690017 Glycine max
Glyma.06G165100 0.5kb downstream 0.5kb downstream 3853 true Chr06: 13690018-13693870 Glycine max
Glyma.06G165100 0.5kb downstream 0.5kb downstream 500 false Chr06: 13693371-13693870 Glycine max
Glyma.06G165100 1.0kb upstream 1.0kb upstream 4353 true Chr06: 13689018-13693370 Glycine max
Glyma.06G165100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13689018-13690017 Glycine max
Glyma.06G165100 1.0kb downstream 1.0kb downstream 4353 true Chr06: 13690018-13694370 Glycine max
Glyma.06G165100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13693371-13694370 Glycine max
Glyma.06G165100 2.0kb upstream 2.0kb upstream 5353 true Chr06: 13688018-13693370 Glycine max
Glyma.06G165100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13688018-13690017 Glycine max
Glyma.06G165100 2.0kb downstream 2.0kb downstream 5353 true Chr06: 13690018-13695370 Glycine max
Glyma.06G165100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13693371-13695370 Glycine max
Glyma.06G165100 5.0kb upstream 5.0kb upstream 8353 true Chr06: 13685018-13693370 Glycine max
Glyma.06G165100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13685018-13690017 Glycine max
Glyma.06G165100 5.0kb downstream 5.0kb downstream 8353 true Chr06: 13690018-13698370 Glycine max
Glyma.06G165100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13693371-13698370 Glycine max
Glyma.06G165100 10.0kb upstream 10.0kb upstream 13353 true Chr06: 13680018-13693370 Glycine max
Glyma.06G165100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13680018-13690017 Glycine max
Glyma.06G165100 10.0kb downstream 10.0kb downstream 13353 true Chr06: 13690018-13703370 Glycine max
Glyma.06G165100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13693371-13703370 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029642 5273 Angiosperm View MSA
122239679 5265 Fabidae Singleton cluster - no MSA
123984877 5270 Rosid Singleton cluster - no MSA
123560355 5271 Pentapetalae Singleton cluster - no MSA
122595156 5272 Eudicot Singleton cluster - no MSA
121298948 5274 Embryophyte View MSA
123336884 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.543439 0.0 2.0025    
cufflinks 1.95737 0.0 6.4549   High
cufflinks 0.0298846 0.0 0.1251 Low Low
cufflinks 0.106403 0.0 0.420242 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0696625 0.0 0.279656 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0614441 0.0 0.247869 Low  
cufflinks 0.137122 0.0 0.537026 Low  
cufflinks 0.358        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.316        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062       Low
cufflinks 7.039        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.173        
cufflinks 1.393        
cufflinks 10.658     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.923     High  
cufflinks 7.818     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 11.709     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain